PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEA2019
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Subtree rooted at node 111: /--------------- Niben101Scf07444g03006.1 [Nicotiana benthamiana] (2) | | /----- XP_016438555.1 [Nicotiana tabacum] (25) /---------100--------+ /-100+ | | | \----- XP_009589846.1 [Nicotiana tomentosiformis] (62) | \-99-+ | | /----- Niben101Scf01432g01005.1 [Nicotiana benthamiana] (26) | \-99-+ | \----- XP_009780790.1 [Nicotiana sylvestris] (36) | | /----- Solyc02g093150.2.1 [Solanum lycopersicum] (5) | /-100+ /---100---+ | \----- Sopim02g093150.0.1 [Solanum pimpinellifolium] (11) | | /-100+ | | | \---------- Sopen02g037720.1 [Solanum pennellii] (15) | | /-100-+ | | | \--------------- PGSC0003DMP400007140 [Solanum tuberosum] (60) | | /-100+ | | | \--------------------- Sme2.5_00029.1_g00014.1 [Solanum melongena] (34) | | /-100+ | | | \-------------------------- CA02g14540 [Capsicum annuum] (65) | \-99-+ | | /----- Peaxi162Scf00549g00114.1 [Petunia axillaris] (21) | \-----------100-----------+ | \----- Peinf101Scf00887g04016.1 [Petunia inflata] (42) | | /--------------- PGSC0003DMP400011494 [Solanum tuberosum] (4) | | | | /----- Sopim03g044300.0.1 [Solanum pimpinellifolium] (19) | /-100-+ /-100+ | | | | \----- Solyc03g044300.2.1 [Solanum lycopersicum] (29) | | \-100+ | /-100+ \---------- Sopen03g008400.3 [Solanum pennellii] (57) | | | | | \--------------------- CA04g08130 [Capsicum annuum] (32) /-100-+ | | | | /----- XP_016483586.1 [Nicotiana tabacum] (18) | | /-100+ /-100+ | | | | | \----- XP_009767489.1 [Nicotiana sylvestris] (39) | | | | /-53-+ | | | | | | /----- XP_009588311.1 [Nicotiana tomentosiformis] (20) | | | | | \-100+ | | | \----100---+ \----- XP_016482629.1 [Nicotiana tabacum] (22) | | /---100---+ | | | | | | /----- Niben101Scf01692g01003.1 [Nicotiana benthamiana] (43) | | | | \----51---+ | | | | \----- Niben101Scf07944g03004.1 [Nicotiana benthamiana] (50) | | | | | | | | /----- Peinf101Scf02377g00005.1 [Petunia inflata] (12) | | | \-----------100-----------+ | | | \----- Peaxi162Scf00685g00012.1 [Petunia axillaris] (55) | | | | | | /----- XP_016459840.1 [Nicotiana tabacum] (6) | | | /-100+ | | | | \----- XP_009804919.1 [Nicotiana sylvestris] (56) | | | /-100+ | | | | \---------- Niben101Scf25996g00006.1 [Nicotiana benthamiana] (7) | | | /-100-+ /-100+ \-100+ | \--------------- Niben101Scf00280g01007.1 [Nicotiana benthamiana] (28) | | | /---100---+ | | | | | /----- XP_016491201.1 [Nicotiana tabacum] (13) | | | | \------100------+ | | | | \----- XP_009626640.1 [Nicotiana tomentosiformis] (54) | | | | | | | | /---------- Sopen02g015090.1 [Solanum pennellii] (17) | | | | | | | | /-100+ /-100+ /----- Solyc02g064960.2.1 [Solanum lycopersicum] (33) | | | | | | \-100+ | | | | | /-100-+ \----- Sopim02g064960.0.1 [Solanum pimpinellifolium] (61) | | | | | | | | | | | | /-100+ \--------------- PGSC0003DMP400044184 [Solanum tuberosum] (53) | | | | | | | /-99-+ | \-100+ \-100+ \--------------------- Sme2.5_10915.1_g00001.1 [Solanum melongena] (52) | | | | | | | | | \-------------------------- CA02g01830 [Capsicum annuum] (59) | | | | | | | | /----- Peaxi162Scf02748g00006.1 [Petunia axillaris] (16) | | | \--------------100-------------+ | | | \----- Peinf101Scf00758g02001.1 [Petunia inflata] (38) | | | | | | /----- Itr_sc000699.1_g00006.1 [Ipomoea trifida] (8) | | \----------------------91----------------------+ | | \----- Itr_sc000150.1_g00028.1 [Ipomoea trifida] (31) --78-+ | | | /--------------- Cc07_g06200 [Coffea canephora] (24) | | | | \--------------------90-------------------+ /---------- Achn363861 [Actinidia chinensis] (47) | | | | \-75-+ /----- DCAR_025748 [Daucus carota] (58) | \-99-+ | \----- DCAR_010874 [Daucus carota] (63) | | /----- KZV24958.1 [Dorcoceras hygrometricum] (10) \---------------------------79---------------------------+ \----- KZV27626.1 [Dorcoceras hygrometricum] (35) Root part of tree: /------------------------------------------------------------------- SMil_00022249-RA_Salv [Salvia miltiorrhiza] (1) | | /--------------------------------- (111) | | | | /-------- 678373509 [Utricularia gibba] (3) | | /---100--+ | | | \-------- 678432994 [Utricularia gibba] (64) | | /--100--+ | /---100--+ | \----------------- EPS67325.1 [Genlisea aurea] (41) | | | | | | | | /-------- 678451334 [Utricularia gibba] (14) | | | | /---100--+ | | | | | \-------- 678378556 [Utricularia gibba] (45) | | \---76--+ | | | |---98--+----------------- 678352329 [Utricularia gibba] (27) | | | | | /---99--+ | \----------------- EPS70767.1 [Genlisea aurea] (30) + | | | | | | \------------------------- Migut.H00413.1.p [Mimulus guttatus] (37) | | | | | | /-------- XP_011097248.1 [Sesamum indicum] (23) | | | /---100--+ | /---97---+ | | \-------- XP_011099110.1 [Sesamum indicum] (44) | | | \-----------100----------+ | | | | /-------- SMil_00009695-RA_Salv [Salvia miltiorrhiza] (49) | | | \---100--+ |--100--+ | \-------- Ote100047180061 [Ocimum tenuiflorum] (51) | | | | | \-------------------------------------------------- KZV34370.1 [Dorcoceras hygrometricum] (46) | | | \----------------------------------------------------------- Migut.L00171.1.p [Mimulus guttatus] (9) | | /-------- Ote100125760111 [Ocimum tenuiflorum] (40) \----------------------------98----------------------------+ \-------- Ote100272460061 [Ocimum tenuiflorum] (48) |