PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM4224
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Subtree rooted at node 104: /--------------- Rsa1.0_26854.1_g00001.1 [Raphanus sativus] (2) | | /----- 676748218 [Sisymbrium irio] (11) /--92-+ /-88-+ | | | \----- Thhalv10000176m [Eutrema salsugineum] (25) | \-100+ /--------------99--------------+ \---------- Bostr.5022s0113.1.p [Boechera stricta] (35) | | | \--------------------- AA46G00051 [Aethionema arabicum] (37) | | /----- Cotton_A_00688_BGI-A2_v1.0 [Gossypium arboreum] (3) | /-100+ | | \----- Gh_A03G1762 [Gossypium hirsutum] (34) | /----100---+ | | | /----- Gorai.005G248900.1 [Gossypium raimondii] (12) | | \-100+ | | \----- Gh_D02G2195 [Gossypium hirsutum] (22) | /-58-+ | | | /--------------- Gh_A13G2204 [Gossypium hirsutum] (8) | | | | | | | | /----- Gorai.001G243800.1 [Gossypium raimondii] (28) | | \-100-+ /-100+ | /---100---+ | | \----- Gh_D13G2509 [Gossypium hirsutum] (32) | | | \-91-+ | | | \---------- Cotton_A_32367_BGI-A2_v1.0 [Gossypium arboreum] (30) | | | | | \-------------------------- Thecc1EG006766t1 [Theobroma cacao] (36) | | | | /----- Ciclev10001058m [Citrus clementina] (5) | | /-100+ | | | \----- orange1.1g014471m [Citrus sinensis] (47) | | /----100---+ /-100+ | | | /----- Neem_28649_f_2 [Azadirachta indica] (24) | | | | \-100+ | | | | \----- Neem_6017_f_3 [Azadirachta indica] (27) | | | | | | | | /----- Gh_D02G0972 [Gossypium hirsutum] (16) | | | | /-100+ | | /-100+ | | \----- Gorai.005G111000.1 [Gossypium raimondii] (43) | | | | | /-100+ | | | | | | | /----- Gh_A03G2097 [Gossypium hirsutum] (20) | | | | /-100+ | \-100+ | | | | | |-100-+ \----- Cotton_A_35746_BGI-A2_v1.0 [Gossypium arboreum] (33) | | | | | | | | | | | | | \--------------- Thecc1EG034172t1 [Theobroma cacao] (17) | | | | | | | | | | | | /----- XP_010539041.1 [Tarenaya hassleriana] (21) | | | | /-100+ |------100------+ | | | | | | | \----- XP_010530317.1 [Tarenaya hassleriana] (46) | | | | | | | | | /-100+ | | | \--------------------- evm.model.supercontig_81.160 [Carica papaya] (26) | | | | | | | | | | | | | | /----- Eucgr.I01335.1.p [Eucalyptus grandis] (29) | | | | \-53-+ \---------100--------+ | | | | | \----- EcC047932.10 [Eucalyptus camaldulensis] (57) | | | | | | | | | | /---------- Neem_1417_f_2 [Azadirachta indica] (14) | | | | | | | \--99-+ | \---------100--------+ /----- Ciclev10028062m [Citrus clementina] (40) | | | \-100+ | | | \----- orange1.1g007579m [Citrus sinensis] (41) /-99-+ | | | | | \----------------------------------------- evm.model.supercontig_150.7 [Carica papaya] (50) | | | | | | /----- XP_010526569.1 [Tarenaya hassleriana] (49) | | \-------------------100------------------+ | | \----- XP_010531490.1 [Tarenaya hassleriana] (51) | | | | /--------------- Rsa1.0_00211.1_g00040.1 [Raphanus sativus] (7) | | | | | | /----- XP_009101922.1 [Brassica rapa] (9) | | /-100-+ /-100+ | | | | | \----- GSBRNA2T00018899001 [Brassica napus] (42) | | | \-100+ | | | | /----- GSBRNA2T00100331001 [Brassica napus] (44) | | | \-100+ | | | \----- XP_013592919.1 [Brassica oleracea] (52) | | | | | /-100+ /----- GSBRNA2T00061084001 [Brassica napus] (15) | | | | /-100+ --85-+ | | | | \----- XP_013622401.1 [Brassica oleracea] (48) | | | | /-100+ | | | | | | /----- XP_009109517.1 [Brassica rapa] (31) | | | | | \-100+ | | | \-100-+ \----- GSBRNA2T00150876001 [Brassica napus] (55) | | /-97-+ | | | | | | /----- RrC5291_p1 [Raphanus raphanistrum] (19) | | | | \---100---+ | | | | \----- Rsa1.0_00944.1_g00013.1 [Raphanus sativus] (45) | | | | | \-----------100-----------+ | /----- Tp7g36940 [Thellungiella parvula] (10) | | \---------50---------+ | | \----- 676743850 [Sisymbrium irio] (38) | | | \------------------------------- Thhalv10024895m [Eutrema salsugineum] (18) | | /----- Cagra.1383s0070.1.p [Capsella grandiflora] (13) | /-100+ | | \----- Carubv10004500m [Capsella rubella] (56) \------------------------100------------------------+ \---------- Bostr.25542s0069.1.p [Boechera stricta] (54) Root part of tree: /------------------------------------------------------------------- AT4G38900.1 [Arabidopsis thaliana] (1) | | /-------------------------------------------------- (104) | | |-------100------+ /--------------------------------- Csa10g001610.1 [Camelina sativa] (4) | | | + \-------100------+ /----------------- Csa11g001790.1 [Camelina sativa] (23) | \------100------+ | \----------------- Csa12g001690.1 [Camelina sativa] (39) | | /----------------- Araha.16804s0010.1.p [Arabidopsis halleri] (6) \------------------------91-----------------------+ \----------------- 856577 [Arabidopsis lyrata] (53) |