PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM3015
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 120: /----- Rsa1.0_00149.1_g00016.1 [Raphanus sativus] (3) /---100---+ | \----- RrC11758_p1 [Raphanus raphanistrum] (37) | /-100-+ /----- XP_009144919.1 [Brassica rapa] (4) | | /-100+ | | | \----- GSBRNA2T00043369001 [Brassica napus] (58) | \-100+ /----95---+ | /----- GSBRNA2T00058888001 [Brassica napus] (38) | | \-100+ | | \----- XP_013585111.1 [Brassica oleracea] (61) | | | \--------------------- Tp1g37920 [Thellungiella parvula] (11) | | /--------------------- 676714748 [Sisymbrium irio] (5) | | | | /----- XP_009147777.1 [Brassica rapa] (6) | | /-100+ |----53---+ | \----- GSBRNA2T00025242001 [Brassica napus] (60) | | /-100+ | | | | /----- XP_013590962.1 [Brassica oleracea] (63) | | | \-100+ | \-100-+ \----- GSBRNA2T00025976001 [Brassica napus] (65) | | | | /----- Rsa1.0_01802.1_g00004.1 [Raphanus sativus] (15) /-100+ \---100---+ | | \----- RrC3812_p1 [Raphanus raphanistrum] (31) | | | | /----- Araha.20205s0001.1.p [Arabidopsis halleri] (12) | | /-99-+ | | | \----- 892081 [Arabidopsis lyrata] (35) | | /-100+ | | | \---------- AT1G51190.1 [Arabidopsis thaliana] (22) | | | | | /--57-+--------------- Bostr.26675s0071.1.p [Boechera stricta] (19) | | | | | | /-54-+ \--------------- KFK35872.1 [Arabis alpina] (47) | | | | /----78---+ | | \--------------------- Thhalv10011353m [Eutrema salsugineum] (29) | | | | | | | | /----- Csa03g058080.1 [Camelina sativa] (17) | | \-65-+ /-92-+ | | | | \----- Csa17g089940.1 [Camelina sativa] (67) | | | /-100+ | | | | \---------- Csa14g059520.1 [Camelina sativa] (42) | | \----99----+ | | | /----- Carubv10012248m [Capsella rubella] (43) | | \---100---+ | | \----- Cagra.2093s0009.1.p [Capsella grandiflora] (53) | | | \------------------------------------ AA2G00186 [Aethionema arabicum] (14) | | /----- Cotton_A_23598_BGI-A2_v1.0 [Gossypium arboreum] (7) | /-100+ | | \----- Gh_A07G1138 [Gossypium hirsutum] (56) | /-100+ | | | /----- Gorai.001G140000.1 [Gossypium raimondii] (36) | | \-55-+ | | \----- Gh_D07G1235 [Gossypium hirsutum] (57) | /-100-+ /-100-+ | | /----- Gorai.006G129400.1 [Gossypium raimondii] (24) | | | | /-100+ | | | | | \----- Gh_D09G1085 [Gossypium hirsutum] (32) | | | \-100+ | | /-100+ | /----- Cotton_A_01831_BGI-A2_v1.0 [Gossypium arboreum] (39) | | | | \-100+ | | | | \----- Gh_A09G1077 [Gossypium hirsutum] (46) | | | | | | | \--------------------- Thecc1EG040576t1 [Theobroma cacao] (16) | | | | | /-95-+ /----- Neem_8648_f_1 [Azadirachta indica] (20) | | | | /-100+ | | | | | \----- Neem_20155_f_1 [Azadirachta indica] (49) /-100+ | | | /-100+ | | | | | | | /----- orange1.1g041657m [Citrus sinensis] (21) | | | /-100+ | | \-100+ | | | | | \----80----+ \----- Ciclev10014809m [Citrus clementina] (66) | | | | | | | | | | | \--------------- evm.model.supercontig_84.82 [Carica papaya] (25) | | | /-78-+ | | | | | | \------------------------------- Eucgr.J00792.1.p [Eucalyptus grandis] (44) /-68-+ | | | | | | | \-100+ \------------------------------------ XP_010544229.1 [Tarenaya hassleriana] (28) | | | | | | | \----------------------------------------- XP_010545572.1 [Tarenaya hassleriana] (51) | | | | | \---------------------------------------------------- AA26G00748 [Aethionema arabicum] (45) | | | | /----- Thhalv10020382m [Eutrema salsugineum] (55) | \-------------------------91------------------------+ | \----- Tp3g18860 [Thellungiella parvula] (62) | | /----- GSBRNA2T00122353001 [Brassica napus] (8) | /-100+ | | \----- XP_013585217.1 [Brassica oleracea] (23) | /-100+ | | | /----- XP_009145544.1 [Brassica rapa] (13) | | \-97-+ --100+ /--99-+ \----- GSBRNA2T00009262001 [Brassica napus] (54) | | | | | \--------------- 676794162 [Sisymbrium irio] (41) | | | | /----- GSBRNA2T00077645001 [Brassica napus] (10) |-------------------100------------------+ /-100+ | | | \----- XP_013589373.1 [Brassica oleracea] (27) | | /-64-+ | | | | /----- GSBRNA2T00022850001 [Brassica napus] (18) | | | \-99-+ | \-100-+ \----- XP_009110086.1 [Brassica rapa] (34) | | | | /----- Rsa1.0_00005.1_g00002.1 [Raphanus sativus] (50) | \---100---+ | \----- RrC1442_p1 [Raphanus raphanistrum] (64) | \-------------------------------------------------------------- KFK39402.1 [Arabis alpina] (30) Root part of tree: /------------------------------------------------------------------- Carubv10015558m [Capsella rubella] (1) | |------------------------------------------------------------------- Cagra.10399s0013.1.p [Capsella grandiflora] (26) | | /-------------------------------------------------- Bostr.19424s0566.1.p [Boechera stricta] (2) | | + |-------------------------------------------------- (120) | | | | /----------------- Csa19g028820.1 [Camelina sativa] (9) | | | | |---------------100--------------+----------------- Csa01g023920.1 [Camelina sativa] (40) \-------100------+ | | \----------------- Csa15g031200.1 [Camelina sativa] (48) | | /----------------- Araha.6726s0001.1.p [Arabidopsis halleri] (33) | /-------73------+ | | \----------------- 898520 [Arabidopsis lyrata] (59) \-------100------+ \--------------------------------- AT3G20840.1 [Arabidopsis thaliana] (52) |