PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM5946
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Subtree rooted at node 76: /----- Rsa1.0_00083.1_g00034.1 [Raphanus sativus] (2) /---100---+ | \----- RrC2310_p3 [Raphanus raphanistrum] (33) | /----------------------100---------------------+ /----- XP_009125864.1 [Brassica rapa] (7) | | /-100+ | | | \----- GSBRNA2T00143425001 [Brassica napus] (42) | \-100+ | | /----- XP_013620960.1 [Brassica oleracea] (17) | \-100+ | \----- GSBRNA2T00151958001 [Brassica napus] (21) | | /----- 861669 [Arabidopsis lyrata] (3) | /-100+ | | \----- Araha.3202s0007.1.p [Arabidopsis halleri] (41) | /----100---+ | | \---------- AT5G12840.1 [Arabidopsis thaliana] (36) | | | | /---------- Csa08g004690.1 [Camelina sativa] (9) | /--------100--------+ | | | | /-100+ /----- Csa20g018140.1 [Camelina sativa] (14) | | | | \-98-+ | | | | \----- Csa13g015380.1 [Camelina sativa] (37) | | \--89-+ | | | /---------- Bostr.2902s0020.1.p [Boechera stricta] (11) | | | | | | \-84-+ /----- Carubv10001701m [Capsella rubella] (18) | | \-100+ | | \----- Cagra.1535s0021.1.p [Capsella grandiflora] (38) | | | | /----- Neem_3953_f_1 [Azadirachta indica] (4) | | /-100+ --72-+ | | \----- Neem_26476_f_1 [Azadirachta indica] (40) | | /----100---+ | | | | /----- orange1.1g018999m [Citrus sinensis] (25) | | | \-100+ | | | \----- Ciclev10015805m [Citrus clementina] (26) | /-100+ | | | | | /----- Cotton_A_02567_BGI-A2_v1.0 [Gossypium arboreum] (22) | | | /-76-+ /-99-+ | | | | | | \----- Gh_A13G1874 [Gossypium hirsutum] (31) | | | | | /-100+ | | | | | | | /----- Gorai.013G251200.1 [Gossypium raimondii] (27) | | | | | | \-100+ | | | /-100+ \-100-+ \----- Gh_D13G2262 [Gossypium hirsutum] (45) | | | | | | | | | | | \--------------- Thecc1EG040712t1 [Theobroma cacao] (24) | | | | | | | | | | /----- Eucgr.J00764.1.p [Eucalyptus grandis] (30) | /--93-+ | /-100+ \---------100--------+ | | | | | | \----- EcC000134.10 [Eucalyptus camaldulensis] (46) | | | | | | | | | | | | /----- XP_010519750.1 [Tarenaya hassleriana] (16) | | | | | | | | | | \-71-+ \------------94-----------+----- XP_010555018.1 [Tarenaya hassleriana] (19) | | | | | | /-95-+ | | \----- XP_010536085.1 [Tarenaya hassleriana] (44) | | | | | | | | | \------------------------------------ AA44G00500 [Aethionema arabicum] (23) | | | | \-100+ | \---------------------------------------------- Thhalv10014364m [Eutrema salsugineum] (35) | | | \---------------------------------------------------- Tp6g31110 [Thellungiella parvula] (32) | \--------------------------------------------------------- 676744862 [Sisymbrium irio] (28) Root part of tree: /------------------------------------------------------------------- Rsa1.0_00016.1_g00003.1 [Raphanus sativus] (1) | |------------------------------------------------------------------- RrC7189_p2 [Raphanus raphanistrum] (43) | | /--------------------------------------------- (76) | | | | /----------- XP_013625409.1 [Brassica oleracea] (5) | | /----99----+ + | | \----------- GSBRNA2T00140306001 [Brassica napus] (6) | /----100---+ /----95----+ | | | | | /----------- XP_009131289.1 [Brassica rapa] (20) | | | | \----100---+ | | | | \----------- GSBRNA2T00129889001 [Brassica napus] (39) | | \----100----+ | | | /----------- Rsa1.0_00509.1_g00014.1 [Raphanus sativus] (8) | | | /----74----+ \----100---+ | | \----------- Rsa1.0_71541.1_g00001.1 [Raphanus sativus] (34) | \----100---+ | \---------------------- RrC463_p9 [Raphanus raphanistrum] (15) | | /----------- GSBRNA2T00104205001 [Brassica napus] (10) | /----100---+ | | \----------- XP_013611224.1 [Brassica oleracea] (12) \---------------100---------------+ | /----------- GSBRNA2T00011831001 [Brassica napus] (13) \----100---+ \----------- XP_009121834.1 [Brassica rapa] (29) |