PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM5548
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Subtree rooted at node 89: /----- GSBRNA2T00128323001 [Brassica napus] (3) /-100+ | \----- XP_009102547.1 [Brassica rapa] (12) /-100+ | | /----- GSBRNA2T00142760001 [Brassica napus] (20) | \-100+ /-100-+ \----- XP_013597072.1 [Brassica oleracea] (26) | | | | /----- RrC5222_p1 [Raphanus raphanistrum] (17) /-97-+ \---100---+ | | \----- Rsa1.0_04605.1_g00002.1 [Raphanus sativus] (23) | | | \--------------------- 676794544 [Sisymbrium irio] (24) /-74-+ | | /----- RrC4438_p3 [Raphanus raphanistrum] (36) | | /-100+ | | | \----- Rsa1.0_00169.1_g00004.1 [Raphanus sativus] (45) | \------100------+ /-99-+ | /----- XP_013618564.1 [Brassica oleracea] (37) | | \-100+ | | \----- XP_009106193.1 [Brassica rapa] (39) /-68-+ | | | \------------------------------- Tp3g21790 [Thellungiella parvula] (10) | | | \------------------------------------ Thhalv10002558m [Eutrema salsugineum] (34) | /-86-+ /----- RrC9504_p1 [Raphanus raphanistrum] (6) | | /---100---+ | | | \----- Rsa1.0_28455.1_g00001.1 [Raphanus sativus] (49) | | | | \-----------100-----------+ /----- XP_009135875.1 [Brassica rapa] (7) | | /-100+ | | | \----- GSBRNA2T00154882001 [Brassica napus] (48) | \-100+ | | /----- XP_013622358.1 [Brassica oleracea] (27) | \-100+ | \----- GSBRNA2T00158357001 [Brassica napus] (44) | | /----- Araha.9810s0006.1.p [Arabidopsis halleri] (5) | /-93-+ | | \----- 898955 [Arabidopsis lyrata] (46) /-100-+ /-------93------+ | | | \---------- AT3G24140.1 [Arabidopsis thaliana] (21) | | | | | | /--------------------- Bostr.19424s0222.1.p [Boechera stricta] (11) | | /----99---+ | | | | | | /----- Csa01g029870.1 [Camelina sativa] (13) | | | | | /-97-+ | | | \-99-+ | \----- Csa19g035800.1 [Camelina sativa] (15) | | | | /-100+ | | | | | \---------- Csa15g048420.1 [Camelina sativa] (47) | | | \--95-+ | | | | /----- Carubv10013821m [Capsella rubella] (16) | | | \---100---+ | | | \----- Cagra.0026s0026.1.p [Capsella grandiflora] (40) | | | /-100+ \---100---+ /--------------- XP_009107621.1 [Brassica rapa] (8) | | | | | | | | /----- GSBRNA2T00042382001 [Brassica napus] (29) | | | /-100-+ /-97-+ | | | | | | \----- GSBRNA2T00002574001 [Brassica napus] (38) | | | | \-96-+ | | | /-89-+ \---------- XP_013631585.1 [Brassica oleracea] (35) | | | | | | | | /-100+ \--------------------- 676793050 [Sisymbrium irio] (25) /-100+ | | | | | | | \-100+ \-------------------------- Tp3g21660 [Thellungiella parvula] (43) | | | | | | | \------------------------------- Thhalv10002990m [Eutrema salsugineum] (22) | | | | | \---------------------------------------------------- AA50G00006 [Aethionema arabicum] (19) --97-+ | | | /----- XP_010532793.1 [Tarenaya hassleriana] (9) | \-------------------------90------------------------+ | \----- XP_010527480.1 [Tarenaya hassleriana] (33) | \-------------------------------------------------------------- evm.model.supercontig_59.132 [Carica papaya] (31) Root part of tree: /------------------------------------------------------------------- orange1.1g014446m [Citrus sinensis] (1) | |------------------------------------------------------------------- Ciclev10005031m [Citrus clementina] (14) | | /---------------------- Gh_A10G1098 [Gossypium hirsutum] (2) | | | /----100---+ /----------- Gorai.011G159100.1 [Gossypium raimondii] (28) | | \----100---+ + /-----87----+ \----------- Gh_D10G1411 [Gossypium hirsutum] (42) | | | | | \--------------------------------- Thecc1EG020336t1 [Theobroma cacao] (18) | /----100---+ | | | /---------------------- (89) | | | | | | \----------89----------+ /----------- EcC053464.10 [Eucalyptus camaldulensis] (32) \----100---+ \----100---+ | \----------- Eucgr.H02788.1.p [Eucalyptus grandis] (41) | | /----------- Neem_1853_f_2 [Azadirachta indica] (4) \---------------------100--------------------+ \----------- Neem_28893_f_1 [Azadirachta indica] (30) |