PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027125608.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 361aa    MW: 40067 Da    PI: 8.2287
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027125608.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.13.8e-17157206255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr++   ++Wv+e r+p   +k++r++lg+f t+e+Aa+a++ a+++l+g
  XP_027125608.1 157 IYRGVRRRN-GNKWVCEMREP---NKKTRIWLGTFQTPEMAARAHDVAALALRG 206
                     69****887.9******9998...347*************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    
MRIDRDGKIC KSREAILTKN GTIFRVFIIH VPSGPYGRKT NRECRERRTV RRECAPALQI  60
FRLAVANLPS DDFQEISVAN SFLEQYLSLF AHEDVRSGIQ YSIREGYHSS TSPSSSSSSP  120
SSSSSSSSDD NCNVTAKSSS HKRKAGRRKF KETRHPIYRG VRRRNGNKWV CEMREPNKKT  180
RIWLGTFQTP EMAARAHDVA ALALRGDHAA LNFADSAWRV ARAQSSLASD IQIAALQAAQ  240
AFRPSLVDAN PSSSSSPSLQ HGDPVEKFDC KNSSANDPLD VKGQDKVPDH PILGLMDVEI  300
GAENICCHSA TMFVDEEAVF NMPALIDNMA EGMLLTPPAM KKGFHWDNGE GDDIELTLWR  360
D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25480.12e-44ERF family protein