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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Coffea arabica
Transcription Factors
The gene annotaion from NCBI(v100) is used to identify transcription factors (TFs) of Coffea arabica (See datasource). Acorrding to the family assignment rules,
3750
TFs (2483
loci) are identified and classified into
57
families. You can download the TF list (here) and protein sequences of TFs (here), or download them on the download page.
Browse by Family
| AP2 (44) | ARF (42) | ARR-B (44) | B3 (174) | BBR-BPC (21) |
| BES1 (14) | C2H2 (189) | C3H (111) | CAMTA (15) | CO-like (17) |
| CPP (12) | DBB (18) | Dof (38) | E2F/DP (18) | EIL (9) |
| ERF (192) | FAR1 (297) | G2-like (112) | GATA (51) | GRAS (155) |
| GRF (16) | GeBP (14) | HB-PHD (5) | HB-other (27) | HD-ZIP (75) |
| HRT-like (6) | HSF (62) | LBD (75) | LFY (2) | LSD (16) |
| M-type_MADS (78) | MIKC_MADS (115) | MYB (205) | MYB_related (146) | NAC (183) |
| NF-X1 (11) | NF-YA (39) | NF-YB (42) | NF-YC (36) | Nin-like (65) |
| RAV (6) | S1Fa-like (1) | SAP (1) | SBP (38) | SRS (7) |
| STAT (2) | TALE (54) | TCP (50) | Trihelix (72) | VOZ (5) |
| WOX (25) | WRKY (114) | Whirly (4) | YABBY (11) | ZF-HD (19) |
| bHLH (382) | bZIP (168) |
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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