PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027115349.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

bZIP

Protein Properties

Length: 418aa MW: 44339.2 Da PI: 8.8183

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027115349.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	63.6	3.6e-20	275	337	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkrerrkq+NRe+ArrsR+RK+ae+eeL++kv++L+aeN +Lk+e+ +l++ +++lk e+ XP_027115349.1 275 ERELKRERRKQSNRESARRSRLRKQAETEELAKKVQSLTAENLSLKSEMHKLTESSERLKLEN 337 89**********************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 418 aa Download sequence
MGNSDEAKSS KPEKSSSPAP DQANVHVYPD WAAMQAYYGP RVAVPPYFNS AVASGHPPHP 60 YMWGPAQPMM SPYGTPYAAI YPHAGVYAHP GVPLGSHANG LGVLPSPTVT EATAAVPLSL 120 DAPVKSSANT DKGFTNKLKG FDGLAMSIGN GSSDRAGAGS DHGISQSEDT EGSSDGSNGN 180 TTKVGQNNKK RSREGTPSDA AGEGKNLTPK SPICTGEVNG TSAKVMGMTV ATANEAEKVT 240 GSVLSPNMTS TLELRNPSGG NMKTSPVSEA WLQNERELKR ERRKQSNRES ARRSRLRKQA 300 ETEELAKKVQ SLTAENLSLK SEMHKLTESS ERLKLENATM MEKLKSTQLG QTGNLSLSKF 360 DEMRLQPVGT ANLLARVNNS GSVDRNDEEG EVFENTKSGA KLRQLLDANP RTDAVAAG

Sequence ? help Back to Top

Protein Sequence Length: 418 aa Download sequence

MGNSDEAKSS KPEKSSSPAP DQANVHVYPD WAAMQAYYGP RVAVPPYFNS AVASGHPPHP  60
YMWGPAQPMM SPYGTPYAAI YPHAGVYAHP GVPLGSHANG LGVLPSPTVT EATAAVPLSL  120
DAPVKSSANT DKGFTNKLKG FDGLAMSIGN GSSDRAGAGS DHGISQSEDT EGSSDGSNGN  180
TTKVGQNNKK RSREGTPSDA AGEGKNLTPK SPICTGEVNG TSAKVMGMTV ATANEAEKVT  240
GSVLSPNMTS TLELRNPSGG NMKTSPVSEA WLQNERELKR ERRKQSNRES ARRSRLRKQA  300
ETEELAKKVQ SLTAENLSLK SEMHKLTESS ERLKLENATM MEKLKSTQLG QTGNLSLSKF  360
DEMRLQPVGT ANLLARVNNS GSVDRNDEEG EVFENTKSGA KLRQLLDANP RTDAVAAG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	292	298	RRSRLRK
2	292	299	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46270.1	1e-119	bZIP family protein