PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027101615.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 304aa    MW: 33355.3 Da    PI: 7.95
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027101615.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.83.5e-20154203255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr+++ +g+W+AeIrdp+    + +r++lg+f tae+Aa+a+++a+ +++g
  XP_027101615.1 154 NYRGVRQRP-WGKWAAEIRDPR----KaARVWLGTFETAEDAARAYDRAAIEFRG 203
                     59*******.**********94....36************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MQRSTKRLKQ EGIPLTSSHA TSILPPPLPP PPPPPRMITS EQEVSVMVAA LKNVIAGSST  60
ATTTTTATPY ADANTLHDFR LFPPSFFECA TASSSSSSSS AFFNANNLVV PAAAVQTCQL  120
CGYEGCLGCN YFSPSAAPVE DNNKKNGVKR KKKNYRGVRQ RPWGKWAAEI RDPRKAARVW  180
LGTFETAEDA ARAYDRAAIE FRGPRAKLNF PFSDYTLDGH QSSSSSQQVP ERDQQHHHHL  240
PHKQLQPEIK AKNEIVDSSG MELGTSNGME FWEAIGEDEI QQWMMMMDFQ GHSSSSGSGN  300
VHSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.11e-26ERF family protein