PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027101168.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

TALE

Protein Properties

Length: 856aa MW: 93890.5 Da PI: 7.4705

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027101168.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.8	4.2e-09	667	699	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 ++yp+ +++ LA+++gL+ +qV++WF N R + XP_027101168.1 667 HPYPTDADKHMLATQTGLSRNQVSNWFINARVR 699 89*****************************87 PP
2	BELL	102	4.5e-33	521	586	7	72
BELL 7 kkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +kkakLl +leeV++rYk+y++q+q+v+ssFe vagl +a+p++s Alk+++rhFrc+++ai++q+ XP_027101168.1 521 QKKAKLLYMLEEVCRRYKHYHQQMQMVVSSFESVAGLTAATPFISQALKTVARHFRCIRNAISDQL 586 79*************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 856 aa Download sequence
METGNFRPEL HVAQQSRRDK LRVQHHPNPC NQNVEVYANQ LVPFSTHEGL NPDLIQLRSI 60 RYGNLSYEPL VFSSEMLDFS TNSQALLAHS NKDVTMLHQE SKRIAGDVED PSTNLSNTLP 120 SNVNSSAKVS GDPQNCSTWK SIGSQESCDW ITNYTSGSAG GIDSNHNPIF VGGGLSGSLK 180 ANNNNPSTST IYFNKPSSSY GNHHEIRSSL TSPPGEISSR NSPKNHVGHG HFNSPSVYHT 240 ANTFQEVSSA TIMTQELGVA AIAQQHSKEI AHVSWPNGGN ELVLLPAYAD HSNPLGLKHG 300 SGECRRWNGE LEYCASTKNA AERDHRSIAN DSPNTQALSL SLSSVPLSKS YACQTGERIM 360 SEDLHSGAGC FSNIQEIKAL KSDYHCFDSK PSYHGKVLES AQHDMVGNPT FAHRAAGPLG 420 PFTGYATILK SSKFLKPAQQ LLDDFCNVFG PKCTKMPEPP ERISAEIRAC DNAVNANESI 480 IGALAGDSGG SSSTFYSSNE KTQDHGGLSS PTESYRPDYL QKKAKLLYML EEVCRRYKHY 540 HQQMQMVVSS FESVAGLTAA TPFISQALKT VARHFRCIRN AISDQLKNVR KALGEDLASP 600 TTGTSSSKGD ICTSRLKLMD QTFQKQKVVG GNVGFFEPQQ HVWRPQRGLP ERAVAILRAW 660 LFDHFLHPYP TDADKHMLAT QTGLSRNQVS NWFINARVRV WKPMVEEIHT LETKGTAETG 720 ASVGKTDGKA MTESVSRSND SQPLNRLNAG RSSEKQVECS DVGSSVYMGS RMNDDTWNQK 780 RSRVECHVPG SMDGSLVGFV PYQQSGIEIG GLGAVSLTLG LRQNADGVQP QHPLQQQHEN 840 QLRRHFGDQI IYDFVG

Sequence ? help Back to Top

Protein Sequence Length: 856 aa Download sequence

METGNFRPEL HVAQQSRRDK LRVQHHPNPC NQNVEVYANQ LVPFSTHEGL NPDLIQLRSI  60
RYGNLSYEPL VFSSEMLDFS TNSQALLAHS NKDVTMLHQE SKRIAGDVED PSTNLSNTLP  120
SNVNSSAKVS GDPQNCSTWK SIGSQESCDW ITNYTSGSAG GIDSNHNPIF VGGGLSGSLK  180
ANNNNPSTST IYFNKPSSSY GNHHEIRSSL TSPPGEISSR NSPKNHVGHG HFNSPSVYHT  240
ANTFQEVSSA TIMTQELGVA AIAQQHSKEI AHVSWPNGGN ELVLLPAYAD HSNPLGLKHG  300
SGECRRWNGE LEYCASTKNA AERDHRSIAN DSPNTQALSL SLSSVPLSKS YACQTGERIM  360
SEDLHSGAGC FSNIQEIKAL KSDYHCFDSK PSYHGKVLES AQHDMVGNPT FAHRAAGPLG  420
PFTGYATILK SSKFLKPAQQ LLDDFCNVFG PKCTKMPEPP ERISAEIRAC DNAVNANESI  480
IGALAGDSGG SSSTFYSSNE KTQDHGGLSS PTESYRPDYL QKKAKLLYML EEVCRRYKHY  540
HQQMQMVVSS FESVAGLTAA TPFISQALKT VARHFRCIRN AISDQLKNVR KALGEDLASP  600
TTGTSSSKGD ICTSRLKLMD QTFQKQKVVG GNVGFFEPQQ HVWRPQRGLP ERAVAILRAW  660
LFDHFLHPYP TDADKHMLAT QTGLSRNQVS NWFINARVRV WKPMVEEIHT LETKGTAETG  720
ASVGKTDGKA MTESVSRSND SQPLNRLNAG RSSEKQVECS DVGSSVYMGS RMNDDTWNQK  780
RSRVECHVPG SMDGSLVGFV PYQQSGIEIG GLGAVSLTLG LRQNADGVQP QHPLQQQHEN  840
QLRRHFGDQI IYDFVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27990.1	2e-90	TALE family protein