PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027101167.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
|
||||||||
Family | TALE | ||||||||
Protein Properties | Length: 856aa MW: 93890.5 Da PI: 7.4705 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 27.8 | 4.2e-09 | 667 | 699 | 22 | 54 |
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 ++yp+ +++ LA+++gL+ +qV++WF N R + XP_027101167.1 667 HPYPTDADKHMLATQTGLSRNQVSNWFINARVR 699 89*****************************87 PP | |||||||
2 | BELL | 102 | 4.5e-33 | 521 | 586 | 7 | 72 |
BELL 7 kkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +kkakLl +leeV++rYk+y++q+q+v+ssFe vagl +a+p++s Alk+++rhFrc+++ai++q+ XP_027101167.1 521 QKKAKLLYMLEEVCRRYKHYHQQMQMVVSSFESVAGLTAATPFISQALKTVARHFRCIRNAISDQL 586 79*************************************************************997 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 856 aa Download sequence |
METGNFRPEL HVAQQSRRDK LRVQHHPNPC NQNVEVYANQ LVPFSTHEGL NPDLIQLRSI 60 RYGNLSYEPL VFSSEMLDFS TNSQALLAHS NKDVTMLHQE SKRIAGDVED PSTNLSNTLP 120 SNVNSSAKVS GDPQNCSTWK SIGSQESCDW ITNYTSGSAG GIDSNHNPIF VGGGLSGSLK 180 ANNNNPSTST IYFNKPSSSY GNHHEIRSSL TSPPGEISSR NSPKNHVGHG HFNSPSVYHT 240 ANTFQEVSSA TIMTQELGVA AIAQQHSKEI AHVSWPNGGN ELVLLPAYAD HSNPLGLKHG 300 SGECRRWNGE LEYCASTKNA AERDHRSIAN DSPNTQALSL SLSSVPLSKS YACQTGERIM 360 SEDLHSGAGC FSNIQEIKAL KSDYHCFDSK PSYHGKVLES AQHDMVGNPT FAHRAAGPLG 420 PFTGYATILK SSKFLKPAQQ LLDDFCNVFG PKCTKMPEPP ERISAEIRAC DNAVNANESI 480 IGALAGDSGG SSSTFYSSNE KTQDHGGLSS PTESYRPDYL QKKAKLLYML EEVCRRYKHY 540 HQQMQMVVSS FESVAGLTAA TPFISQALKT VARHFRCIRN AISDQLKNVR KALGEDLASP 600 TTGTSSSKGD ICTSRLKLMD QTFQKQKVVG GNVGFFEPQQ HVWRPQRGLP ERAVAILRAW 660 LFDHFLHPYP TDADKHMLAT QTGLSRNQVS NWFINARVRV WKPMVEEIHT LETKGTAETG 720 ASVGKTDGKA MTESVSRSND SQPLNRLNAG RSSEKQVECS DVGSSVYMGS RMNDDTWNQK 780 RSRVECHVPG SMDGSLVGFV PYQQSGIEIG GLGAVSLTLG LRQNADGVQP QHPLQQQHEN 840 QLRRHFGDQI IYDFVG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G27990.1 | 2e-90 | TALE family protein |