PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027091483.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 364aa    MW: 40283.7 Da    PI: 6.2461
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027091483.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.61e-20187236255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+g
  XP_027091483.1 187 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDKAAFKLRG 236
                     59******9.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    
MAAAMDFWNS TPLDLQLDPI KGGELMEALE PFMKSGASSP SYSSSYYNPQ SFSTASPSSF  60
PSMDDQFFSF SSSSPSTSYS APSSFPAQYQ AQFNMYPESC YSSQSTYGLV DQQGSLGLNQ  120
LTPSQIHDIQ SRFSLQNENR HHMISGPFHQ QWPATRQSQS QQQALPFLAP KPVPMKQSAS  180
PPKPTKLYRG VRQRHWGKWV AEIRLPKNRT RLWLGTFDTA EEAALAYDKA AFKLRGDFTR  240
LNFPHLRHNG SLIGGDFGEY KPLHSSVDAK LQAICQSLAE GKGIDGKKSK GTRRKAAEEE  300
KAAAKTVDAG SESETGSGHL TDGSSPVSDL TVPDFTEEEG SWEAYPENLM LEKYPSYEID  360
WAAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.14e-71ERF family protein