PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027088277.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 364aa MW: 41278.2 Da PI: 6.9286

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027088277.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	149.3	1.8e-46	13	141	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyat..gkrknratksgyWkatgkdkevlsk 95 pGfrFhPt+eel+++yLk v gkkl++ ++i +++iy+++PwdLp +k +e+ewyfF++rd+k+ + g r+nr+tk+g+Wkatg+d+++ls XP_027088277.1 13 PGFRFHPTEEELLDFYLKSTVLGKKLHC-DIIGRLNIYDHDPWDLPGLAKIGEREWYFFVPRDRKHGSggGGRPNRTTKRGFWKATGSDRKILSL 106 9*************************.99***********8888899********9963367****************997 PP NAM 96 ..kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +glkktLvfy+grap+g ktdWvm+eyrl XP_027088277.1 107 snPKKMIGLKKTLVFYTGRAPRGCKTDWVMNEYRL 141 656778*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MDDSTTSSDL ELPGFRFHPT EEELLDFYLK STVLGKKLHC DIIGRLNIYD HDPWDLPGLA 60 KIGEREWYFF VPRDRKHGSG GGGRPNRTTK RGFWKATGSD RKILSLSNPK KMIGLKKTLV 120 FYTGRAPRGC KTDWVMNEYR LPDYHDRDHR TCHSLSGTPN AVVLCKIYRK ATSLRVLEQR 180 AGVDQQQPEE AKALSIPVLL HHHHHTSSTD YYYYASGRDP SSSPPLIDDA ASICNNIQQH 240 DLPMPYHHHP LAFKKEDEEL SSGLDKKHVA ITPASPASTA DDDEEDDDDD HDSLECKGKS 300 RTCTNNLRLP STTTTGKSGN KLAELQVPSR LSMDWMQDPF WAQLRSPWLD NLATPNYHAN 360 VLNF

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MDDSTTSSDL ELPGFRFHPT EEELLDFYLK STVLGKKLHC DIIGRLNIYD HDPWDLPGLA  60
KIGEREWYFF VPRDRKHGSG GGGRPNRTTK RGFWKATGSD RKILSLSNPK KMIGLKKTLV  120
FYTGRAPRGC KTDWVMNEYR LPDYHDRDHR TCHSLSGTPN AVVLCKIYRK ATSLRVLEQR  180
AGVDQQQPEE AKALSIPVLL HHHHHTSSTD YYYYASGRDP SSSPPLIDDA ASICNNIQQH  240
DLPMPYHHHP LAFKKEDEEL SSGLDKKHVA ITPASPASTA DDDEEDDDDD HDSLECKGKS  300
RTCTNNLRLP STTTTGKSGN KLAELQVPSR LSMDWMQDPF WAQLRSPWLD NLATPNYHAN  360
VLNF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	7e-88	NAC family protein