PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027080472.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | SRS | ||||||||
Protein Properties | Length: 379aa MW: 42070.8 Da PI: 7.3205 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 24.4 | 8.5e-08 | 46 | 82 | 5 | 41 |
DUF702 5 tasCqdCGnqakkdCaheRCRtCCksrgfdCathvks 41 + +C CGn a+ C ++ C+ CC C+ hv XP_027080472.1 46 KPKCIKCGNVARSRCPYQSCKSCCAKAQNPCHIHVLK 82 568*******************************954 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 379 aa Download sequence |
MAASSPALSN NSNDTPSSSG AGAATFNVNT PPSAAATSKN LRGLNKPKCI KCGNVARSRC 60 PYQSCKSCCA KAQNPCHIHV LKGGSNIPDK INSSSSPATD PQSADVSHSG NSHRVASLRQ 120 LSNTFSQFNN LQTPVRSRKP LTRKDAQVIN EWRFLKLKEF RDRNIEAENE AFDRYMRNVS 180 LLEEVFCVNS ALDWQSEEGS SAANTDRSVD DCNEIMVPGL KLKLRSNPVR IENFRKRVQY 240 IVDQGLRELN KLESNDGNGE LGDPDEMGNR PKKMKSSWRA ERASALSDLI DKLNKARNEE 300 DLKACFDMYS HISKRASKTS QADSDLAEAS DEQNPVDNLL HKERASYAPP NWFSTTPIDQ 360 ESLCRIDSYF CSLEDVEDL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G32730.1 | 1e-95 | SRS family protein |