PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027080423.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 345aa MW: 39010.3 Da PI: 5.4257

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027080423.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	172.7	1.1e-53	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeelv +yLk+k++g ++el evi+ +d+yk++Pw+Lp k + +++ ew+fF++rdkky++g+r+nrat++gyWkatgkd++v+ XP_027080423.1 6 LPPGFRFHPTDEELVGYYLKRKTDGLEIEL-EVIPVIDLYKFDPWELPeKsFLPKRDMEWFFFCPRDKKYPNGSRTNRATRAGYWKATGKDRKVV 99 79**************************.99**********95344555788*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + +++++g +ktLvfy+grap g +tdWvmheyrl XP_027080423.1 100 C-QSAVIGYRKTLVFYRGRAPLGDRTDWVMHEYRL 133 .999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MGGASLPPGF RFHPTDEELV GYYLKRKTDG LEIELEVIPV IDLYKFDPWE LPEKSFLPKR 60 DMEWFFFCPR DKKYPNGSRT NRATRAGYWK ATGKDRKVVC QSAVIGYRKT LVFYRGRAPL 120 GDRTDWVMHE YRLSDDVSQG SPVFKGPYAL CRVIKKNEQK TNDVHGDSTL KQVGSSSHIG 180 NVAPAATISN DPVVISEEIP MQASHIESNN STPIASPHQA SVMGEYDHSS TYSSMGMDPS 240 SNWVSPDMIL DSSKEYRQGQ RLSGYYCPQF EFQNSTSWQT YDPYEASPSS SNSNFREEGE 300 TSDDFTRYGC MSPYSVHGSY MGYYGNEDML YDSFGPPNAL NPNPF

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MGGASLPPGF RFHPTDEELV GYYLKRKTDG LEIELEVIPV IDLYKFDPWE LPEKSFLPKR  60
DMEWFFFCPR DKKYPNGSRT NRATRAGYWK ATGKDRKVVC QSAVIGYRKT LVFYRGRAPL  120
GDRTDWVMHE YRLSDDVSQG SPVFKGPYAL CRVIKKNEQK TNDVHGDSTL KQVGSSSHIG  180
NVAPAATISN DPVVISEEIP MQASHIESNN STPIASPHQA SVMGEYDHSS TYSSMGMDPS  240
SNWVSPDMIL DSSKEYRQGQ RLSGYYCPQF EFQNSTSWQT YDPYEASPSS SNSNFREEGE  300
TSDDFTRYGC MSPYSVHGSY MGYYGNEDML YDSFGPPNAL NPNPF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17980.1	1e-102	NAC family protein