PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027079247.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 279aa    MW: 31980.7 Da    PI: 8.9296
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027079247.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM152.61.8e-47111382128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 
                      pGfrFhPt+eelv++yLk+ ++gkkl+  ++i  ++iy+++Pw+Lp ++k +e+ewyfF++rd+++ +g r+nr+tk+g+Wkatg+d+++ s+ 
  XP_027079247.1  11 LPGFRFHPTEEELVSCYLKRIASGKKLRS-DIIGFLNIYHHDPWELPGMAKMGEREWYFFVHRDRRHGHGGRPNRTTKDGFWKATGSDRQIRSTs 104
                     69************************999.99***************8888999*************************************9986 PP

             NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       +++ glkk+Lvfykgrap+g++tdWvm+e+rl
  XP_027079247.1 105 ePKKVLGLKKILVFYKGRAPRGSRTDWVMNEFRL 138
                     66778***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MDDNSLGELT LPGFRFHPTE EELVSCYLKR IASGKKLRSD IIGFLNIYHH DPWELPGMAK  60
MGEREWYFFV HRDRRHGHGG RPNRTTKDGF WKATGSDRQI RSTSEPKKVL GLKKILVFYK  120
GRAPRGSRTD WVMNEFRLPE HPLPKEDVVL CKIYRKATSL KILEHKAAME DIISKTLEPS  180
LSSTRPQEGI PKENLAKSLA QNQSMTNLPL TKQEDDDLFV LNSPVKFGCL KYSNDSKELR  240
ALDVPKLSMD ETADAFWTPM RSPWLENCSL DAFASLLNC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.13e-77NAC family protein