PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027078368.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 298aa    MW: 33678.6 Da    PI: 6.0476
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027078368.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.93.9e-21105155256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+ge
  XP_027078368.1 105 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDKAAYKLRGE 155
                     59******9.**********965...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MKALEPFMKA HMFSQGLSSF DEMGFDEQSG GGSIGLNHLT PYQILEVEAQ IKLQNQQQQY  60
LAAQSLQNYS STRQLQHQNH SHLSFLGPKP VHMKQVGTPP KPAKLYRGVR QRHWGKWVAE  120
IRLPKNRTRL WLGTFDTAEE AALAYDKAAY KLRGEFARLN FPNLRHQLSQ DFGDFKPLHS  180
SVDAKLEAIC QSLADSQKQG NTGEQQQKKV GVQTIPKVEN TFDDSLNSEY FYPGNEGVKV  240
EETSSSLSPS RSDETSSLEM SSPESDITFL DFAEPTFDQS ENFLLQKYPS VEIDWAAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.12e-57ERF family protein