PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027078362.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 386aa    MW: 42863.4 Da    PI: 5.1033
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027078362.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.45.8e-21193243256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+ge
  XP_027078362.1 193 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDKAAYKLRGE 243
                     59******9.**********965...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    
MATAIDIYSY SNPVFSLSSD PLREELMKAL EPFMKGASSL PSSPTTTSSP FSSSSSSLSP  60
PSTSSSSSCS SYYPFDSSSF SSEPNMYSSF TSYVPSTAHM FSQGLSSFDE MGFDEQSGGG  120
SIGLNHLTPY QILEVEAQIK LQNQQQQYLA AQSLQNYSST RQLQHQNHSH LSFLGPKPVH  180
MKQVGTPPKP AKLYRGVRQR HWGKWVAEIR LPKNRTRLWL GTFDTAEEAA LAYDKAAYKL  240
RGEFARLNFP NLRHQLSQDF GDFKPLHSSV DAKLEAICQS LADSQKQGNT GEQQQKKVGV  300
QTIPKVENTF DDSLNSEYFY PGNEGVKVEE TSSSLSPSRS DETSSLEMSS PESDITFLDF  360
AEPTFDQSEN FLLQKYPSVE IDWAAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.11e-56ERF family protein