PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027078064.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | ERF | ||||||||
Protein Properties | Length: 188aa MW: 20825.4 Da PI: 5.7375 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61 | 2.7e-19 | 40 | 91 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +y GVr ++ +g+++AeIrd + ng r++lg+f+taeeAa a+++a+++++g+ XP_027078064.1 40 HYVGVRKRP-WGKFAAEIRDSTRNG--MRVWLGTFDTAEEAALAYDQAALSMRGP 91 79*******.**********44465..*************************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 188 aa Download sequence |
MDHGTKSFPG ASSSSKEING EEFTLARTRA KEDQYGKEKH YVGVRKRPWG KFAAEIRDST 60 RNGMRVWLGT FDTAEEAALA YDQAALSMRG PVAALNFPTE RVHESLQEMV LFSCEDGLSP 120 AAALKEAHKM RSMSKRRGKR KQLVKGDDLV VFEDLGPDLL DELLSESESS GFTTVAEAAM 180 GNLEQWPP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 135 | 142 | KRRGKRKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 5e-32 | ERF family protein |