PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027077413.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | B3 | ||||||||
Protein Properties | Length: 288aa MW: 33073.1 Da PI: 9.5312 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 54 | 3e-17 | 28 | 118 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 ffkv+ +s++l++p f++++ g++ k ++l+ +g+ W+v + + +++++++++GW+ F++ + Lk g+f+vF++dg+s f +v XP_027077413.1 28 FFKVF--LPDVSSQQLRVPPLFVKKFsGLV---CKRIKLRCIDGKIWDVDV--EETQEGVFMKNGWQAFADHHLLKLGEFLVFRYDGNSVF--TV 113 78888..44555566***********7777...357***************..**********************************9***..** PP EEE-S CS B3 95 kvfrk 99 k+fr+ XP_027077413.1 114 KIFRT 118 **996 PP | |||||||
2 | B3 | 40.1 | 6.8e-13 | 203 | 286 | 10 | 97 |
HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE CS B3 10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvf 97 ++ + l+l+k f+++++++ + ++l +e+ ++W vk+++ + ++ +++GW F k+n+++egD + + +d+ + +++v+ XP_027077413.1 203 RTQMHKLMLSKGFISKNNIE--LGSNVMLCNEKEEKWPVKFTHFRDGR-ACIGTGWMAFWKDNRMCEGDKFKLVFDEGrGG--KMITVC 286 556688*********99766..5668***************8766664.56899***************988887754233..467666 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 288 aa Download sequence |
MVKRGRGRPR KDSSSSSYLS FMDVRPEFFK VFLPDVSSQQ LRVPPLFVKK FSGLVCKRIK 60 LRCIDGKIWD VDVEETQEGV FMKNGWQAFA DHHLLKLGEF LVFRYDGNSV FTVKIFRTHG 120 CKEEAFVREK IAADVKIEPL EDQIAATEHT CAKHSCNSDG EGNKLDTSRG VREGKQQMSS 180 RFHSQTVQME RDSEFGSIRS ISRTQMHKLM LSKGFISKNN IELGSNVMLC NEKEEKWPVK 240 FTHFRDGRAC IGTGWMAFWK DNRMCEGDKF KLVFDEGRGG KMITVCKV |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 3 | 11 | KRGRGRPRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66980.1 | 4e-28 | B3 family protein |