PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027076397.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 190aa    MW: 21511.9 Da    PI: 8.8516
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027076397.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.29.7e-1955105255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y GVr ++ +g+++AeIrd + ng  +r++lg+f ++e+Aa a+++a+ +++g
  XP_027076397.1  55 QYIGVRKRP-WGKYAAEIRDSTRNG--RRVWLGTFESPEDAALAYDQAAFSMRG 105
                     799******.**********44465..*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MDSSSYENPT PDQNFSSEFS FWFLDNNKVP KQELETTEAI QSLNLKRDSK RQEKQYIGVR  60
KRPWGKYAAE IRDSTRNGRR VWLGTFESPE DAALAYDQAA FSMRGPLASL NFPMDRVQKS  120
LEGIKHNWEN GSSPAAVLKA THKIRSSMSK RARRNQEKQG EKVVVELQDL GADLLEELLS  180
SSSESAASSH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.18e-46ERF family protein