PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027061235.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 316aa MW: 36011.9 Da PI: 7.6501

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027061235.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	160.7	5.6e-50	12	137	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhP+deel+++yL k+v+ + + + evd++k+ePwd+p+++ + ke+yf+s+rd+kyatg r+nrat sgyWkatgkd++vl+ XP_027061235.1 12 LPPGFRFHPRDEELICDYLMKRVACCDQPP--LMIEVDLNKCEPWDIPENACVGGKEYYFYSQRDRKYATGLRTNRATLSGYWKATGKDRPVLR- 103 79*******************9988666..6899********7777789**********************************9. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 kg+lvg++ktLvfy+grapkg+ktdWvmhe+rle XP_027061235.1 104 KGTLVGMRKTLVFYQGRAPKGRKTDWVMHEFRLE 137 999**************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 316 aa Download sequence
MMMNLSMVEA KLPPGFRFHP RDEELICDYL MKRVACCDQP PLMIEVDLNK CEPWDIPENA 60 CVGGKEYYFY SQRDRKYATG LRTNRATLSG YWKATGKDRP VLRKGTLVGM RKTLVFYQGR 120 APKGRKTDWV MHEFRLEGPF GPPKLSSLKQ EDWVLCRVFF KNRDNNIIAA KQDMDMNSYD 180 GETSPSPLPP LMDPYFKFGQ TQTNTNEHEQ VPCFSIFSSD QANNNSQPFS YLTHMDLPNF 240 STKNMPTFNF GGIPDFGAYF SSSCCEQKVI KAVLNQLTKL ENASPNVKGS PSFGEASTSD 300 SFLSEVALST MWNNQY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56010.2	1e-111	NAC family protein