PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zosma141g00210.1 | ||||||||
Common Name | ZOSMA_141G00210 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
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Family | ERF | ||||||||
Protein Properties | Length: 176aa MW: 19856.2 Da PI: 6.2917 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.1 | 2.5e-19 | 51 | 100 | 1 | 54 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 + y+GVr++ +g+WvAeIr+p + r kr +lg+f t +Aa+a+++a+k+++ Zosma141g00210.1 51 CNYRGVRQRT-WGKWVAEIREP---N-RgKRLWLGTFPTSLDAARAYDEAAKAMY 100 56*****999.**********8...3.35***********************996 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 1.5E-14 | 51 | 100 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 4.56E-30 | 51 | 111 | No hit | No description |
PROSITE profile | PS51032 | 21.048 | 52 | 109 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 2.4E-29 | 52 | 109 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.7E-32 | 52 | 115 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 3.53E-20 | 52 | 110 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 8.8E-10 | 53 | 64 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 8.8E-10 | 75 | 91 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:0010286 | Biological Process | heat acclimation | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 176 aa Download sequence Send to blast |
MATLEKWKQL NYQLENGKDG EEKAHKPVKP PAKGSRKGCM KGKGGPDNSN CNYRGVRQRT 60 WGKWVAEIRE PNRGKRLWLG TFPTSLDAAR AYDEAAKAMY SSSARLNLNT SPAIHEVNKE 120 NEKIQEEQEE QGEQDISYML DDLSDIIDIN EIMGSVKMEQ PRDLHDGKSD SEAFR* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 2e-15 | 52 | 108 | 5 | 62 | ATERF1 |
3gcc_A | 2e-15 | 52 | 108 | 5 | 62 | ATERF1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription (By similarity). {ECO:0000250}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00302 | DAP | Transfer from AT2G40340 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020267191.1 | 5e-51 | dehydration-responsive element-binding protein 2B-like | ||||
Swissprot | A2WL19 | 5e-45 | DRE2A_ORYSI; Dehydration-responsive element-binding protein 2A | ||||
TrEMBL | A0A0K9PXV4 | 1e-128 | A0A0K9PXV4_ZOSMR; Putative dehydration-responsive element-binding protein 2H | ||||
STRING | XP_002520794.1 | 8e-49 | (Ricinus communis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP7315 | 35 | 51 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40350.1 | 6e-36 | ERF family protein |
Link Out ? help Back to Top | |
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Phytozome | Zosma141g00210.1 |