PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678318829
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family NAC
Protein Properties Length: 558aa    MW: 62099.5 Da    PI: 4.7209
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678318829genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM173.75.4e-54211481128
        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 
                l+pGfrFhPtdeelv +yL++kv gk +++ ++i+++diyk+ePwdLp  +++k+++ ewyfFs  dkky +g+++nrat++gyWk+tgkd++v++ k++
  678318829  21 LAPGFRFHPTDEELVRYYLRRKVCGKGFRI-DAISDIDIYKAEPWDLPsfSRLKSRDMEWYFFSVLDKKYGNGSKTNRATERGYWKTTGKDRAVYH-KSQ 118
                579***************************.99***************6448899999**************************************.999 PP

        NAM  99 lvglkktLvfykgrapkgektdWvmheyrl 128
                +vg+kktLv+++grapkg++t+Wvmheyrl
  678318829 119 VVGMKKTLVYHTGRAPKGQRTNWVMHEYRL 148
                ****************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.22E-6218171IPR003441NAC domain
PROSITE profilePS5100557.67621171IPR003441NAC domain
PfamPF023655.5E-2823148IPR003441NAC domain
PROSITE profilePS502228.823196231IPR002048EF-hand domain
PROSITE patternPS000180209221IPR018247EF-Hand 1, calcium-binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009644Biological Processresponse to high light intensity
GO:0009962Biological Processregulation of flavonoid biosynthetic process
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003677Molecular FunctionDNA binding
GO:0005509Molecular Functioncalcium ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 558 aa     Download sequence    Send to blast
MGISTAAAEK KSRSSESSNM LAPGFRFHPT DEELVRYYLR RKVCGKGFRI DAISDIDIYK  60
AEPWDLPSFS RLKSRDMEWY FFSVLDKKYG NGSKTNRATE RGYWKTTGKD RAVYHKSQVV  120
GMKKTLVYHT GRAPKGQRTN WVMHEYRLTD LDLDKAGIVQ DAFVLCRVFQ KSGSGPKNGE  180
RYGAPFVEEE WEDDELVLDQ KNEMAEIIDF DGDGYLDEHD LEQLLGENNL PDASPRPSNI  240
SYEDSSLGEV VTANVSDPLN LMLNATEECC ELKPISYENS TDIPAPWDAN AKVVRHEFIG  300
ESSKSGNTDL DFLLDEPFFD CNDLLYDSGF LKDDDQPNNS SLSIIDEYLN FVNSDGKNVE  360
SFAFDQPSAP LENHSAAQNA LLPPEELVSQ KPEGGKQESV DYSDYNAAAE SHKLGTTVRR  420
SDLLSPFLKH STSMLGSLPA PPAFASDLSL KDASALGLHS LYQSSSSSHI AAGLIQIRDQ  480
TVAGYQPSQP LIKNLNPNII VSLRFFREND GSATIESSLR LYPAKMLAAI SRSTFFFSLF  540
LVLVLSISLK LGICIAAK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A6e-47101774174Stress-induced transcription factor NAC1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00059PBMTransfer from AT5G04410Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMap678318829
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011076897.10.0NAC domain-containing protein 53 isoform X1
TrEMBLA0A2G9I3Z20.0A0A2G9I3Z2_9LAMI; Uncharacterized protein
STRINGMigut.F01913.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31412450
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10500.16e-98NAC domain containing protein 53