PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_04352-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 294aa    MW: 31236 Da    PI: 9.7541
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_04352-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY74.41.4e-23114175159
                      ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                      ldDg +WrKYGqKe+++s+++r+Y+rCt++    C ++++v+r+++d+ ++ +tY g H+++
  TRIUR3_04352-P1 114 LDDGQAWRKYGQKEIHNSKHSRAYFRCTHKydqLCAAQRQVQRCDDDEGMFRVTYIGVHTCR 175
                      58***************************98878*************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.5E-25100177IPR003657WRKY domain
PROSITE profilePS5081119.141109177IPR003657WRKY domain
SuperFamilySSF1182903.92E-23110177IPR003657WRKY domain
SMARTSM007744.3E-34114176IPR003657WRKY domain
PfamPF031061.7E-21115175IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009862Biological Processsystemic acquired resistance, salicylic acid mediated signaling pathway
GO:0009864Biological Processinduced systemic resistance, jasmonic acid mediated signaling pathway
GO:0010200Biological Processresponse to chitin
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:1900056Biological Processnegative regulation of leaf senescence
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    Send to blast
MEMETPLAQV MDGLIKGREF ATQLQGLLRD SPKAGLIMDQ ILHAFSRAMH AAKAAAAATA  60
ATSGSERSSD VHSEVTDGAS GGRKRKSAAA GGNRKACRRR TQQSSVVTKS VKSLDDGQAW  120
RKYGQKEIHN SKHSRAYFRC THKYDQLCAA QRQVQRCDDD EGMFRVTYIG VHTCRDPAAA  180
AVASHMLHLT GAAEGLHAGC HLISFAPGSS TAAAPSTTTT TMTLNAKLVD EDAATGSGLQ  240
GMKPESGDQE EVLSSRTPGN SAQHSTAAAA TATAPACLAR PGRRDVHPAI RWRR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A2e-34111175569OsWRKY45
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00408DAPTransfer from AT3G56400Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU6654401e-166EU665440.1 Triticum aestivum WRKY11 transcription factor mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020148215.11e-121probable WRKY transcription factor 70
TrEMBLM7ZAK00.0M7ZAK0_TRIUA; Putative WRKY transcription factor 70
STRINGTRIUR3_04352-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP76563549
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.16e-24WRKY DNA-binding protein 46