PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_30611
Common NameMYB3
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family MYB
Protein Properties Length: 294aa    MW: 33094 Da    PI: 4.6306
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_30611genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding568.9e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +grWTteEd+llv+++k  G g+W++ +++ g+ R++k+c++rw +yl
       PEQU_30611 14 KGRWTTEEDQLLVNYIKTNGEGSWRSLPKKAGLLRCGKSCRLRWINYL 61
                     79******************************99************97 PP
2Myb_DNA-binding47.25.2e-1567112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg+ ++eE++ ++++ + lG++ W+ Ia +++ gRt++++k++w+++l
       PEQU_30611  67 RGNISKEEEDMIIQLRANLGNR-WSVIAGHLP-GRTDNEIKNYWNSHL 112
                      7899******************.*********.************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.7E-21564IPR009057Homeodomain-like
PROSITE profilePS5129416.8961IPR017930Myb domain
SuperFamilySSF466898.44E-2811108IPR009057Homeodomain-like
SMARTSM007172.2E-121363IPR001005SANT/Myb domain
PfamPF002491.9E-151461IPR001005SANT/Myb domain
CDDcd001672.25E-81661No hitNo description
PROSITE profilePS5129422.88562116IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.6E-2465116IPR009057Homeodomain-like
SMARTSM007178.9E-1566114IPR001005SANT/Myb domain
PfamPF002491.6E-1367112IPR001005SANT/Myb domain
CDDcd001677.66E-971112No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009651Biological Processresponse to salt stress
GO:0009723Biological Processresponse to ethylene
GO:0009733Biological Processresponse to auxin
GO:0009813Biological Processflavonoid biosynthetic process
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    Send to blast
MGRAPCCEKV GLKKGRWTTE EDQLLVNYIK TNGEGSWRSL PKKAGLLRCG KSCRLRWINY  60
LREDLKRGNI SKEEEDMIIQ LRANLGNRWS VIAGHLPGRT DNEIKNYWNS HLSKKVEGLQ  120
IKDDENCSAG KVRKRKGGRP SKLAKKRKAE AEIASREKGE ERQSMVILED LPSIEILLGD  180
GDNNEEEEGR GKEGSNGVVV EVLASEDGGA SLDEIEKLVD WELEEIALRL WEEEGEAIRE  240
VLPWVWEDER LGSGGEVGGF LDNGSFDAFR DDDYLDNWLL SDLSDASSSW LASC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1h8a_C9e-231211625128MYB TRANSFORMING PROTEIN
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1133147KRKGGRPSKLAKKRK
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00627PBMTransfer from PK06182.1Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF7694680.0KF769468.1 Phalaenopsis equestris MYB transcription factor 3 (MYB3) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020598307.10.0myb-related protein P-like
TrEMBLA0A096ZX720.0A0A096ZX72_PHAEQ; MYB transcription factor 3
STRINGXP_009787226.18e-71(Nicotiana sylvestris)
STRINGXP_009622107.17e-71(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP7938563
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47460.11e-68myb domain protein 12