PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PEQU_19132 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
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Family | ERF | ||||||||
Protein Properties | Length: 324aa MW: 37066.8 Da PI: 6.3463 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61 | 2.7e-19 | 113 | 163 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr++ +g+WvAeIr p+ r r +lg+++ta++Aa a+++a+++++g PEQU_19132 113 CKYRGVRQRT-WGKWVAEIRQPK----RgSRLWLGTYDTAFDAALAYDEAARAMYG 163 79*****999.**********83....46************************987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 9.59E-30 | 113 | 169 | No hit | No description |
Pfam | PF00847 | 1.4E-13 | 113 | 163 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 2.0E-32 | 114 | 177 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 3.1E-29 | 114 | 171 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 20.653 | 114 | 171 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.44E-19 | 114 | 171 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 1.7E-9 | 115 | 126 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.7E-9 | 137 | 153 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:0010286 | Biological Process | heat acclimation | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 324 aa Download sequence Send to blast |
MVLKAFSDTF GSHNTKYFFS LFELHRLFII FFFRPFDLLN SFYPLLFYYC SFRKKGIRKR 60 VSGTNCVAEI LAKWKYQNSE SHSLDTECTR KVPAKGSKKG CMRGKGGPEN SNCKYRGVRQ 120 RTWGKWVAEI RQPKRGSRLW LGTYDTAFDA ALAYDEAARA MYGSYARVNL SQFDSGGHGN 180 LQECSTCIQD EHINLSHCKK SKSETFDSTT TLDATLEADD LKPEAVKEIK PQPSCSEDHQ 240 TEEFMLAKEP IEKHDCLEEM PFDMFHVDEI LGFANGSHIP SSGSDFQCPS TGQEADTMFW 300 SLDQMDYGFP DLRFLDPIFF SELP |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1gcc_A | 9e-18 | 115 | 170 | 3 | 59 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00302 | DAP | Transfer from AT2G40340 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020583192.1 | 0.0 | dehydration-responsive element-binding protein 2A-like | ||||
TrEMBL | A0A2I0VFK7 | 7e-87 | A0A2I0VFK7_9ASPA; Dehydration-responsive element-binding protein 2A |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP7315 | 35 | 51 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40350.1 | 1e-33 | ERF family protein |