PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_38931g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bZIP
Protein Properties Length: 267aa    MW: 29998.5 Da    PI: 6.843
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_38931g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_143.19.3e-14147188546
                    CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                    ++ rr+ +NRe+ArrsR+RK++ ++eL+  v+ L aeN +  
  MA_38931g0010 147 RKKRRMLSNRESARRSRLRKQQHLDELRAQVAHLRAENGQIM 188
                    789***********************************8765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.3E-11137207IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.162145208IPR004827Basic-leucine zipper domain
PfamPF001703.0E-10146188IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.45E-11147198No hitNo description
Gene3DG3DSA:1.20.5.1708.2E-9147213No hitNo description
CDDcd147029.29E-20148199No hitNo description
PROSITE patternPS000360150165IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009845Biological Processseed germination
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    Send to blast
MESEIATAAD FSYFGADRTI IGPESERFVP AFPSLTCLQS DQMLLSHSNE MSIHKNSAVP  60
IHPAQFSREI YDMESTQYNN MNFLANLEAP GAKTAVYAKR SMPVYVDKRC AIQDSLHSLG  120
GNWEAISNSQ SNSASDEADD QQVINVRKKR RMLSNRESAR RSRLRKQQHL DELRAQVAHL  180
RAENGQIMNN FNIFSQHHAR ITEENCLLRS EALELSHKLE RLHHTINAQS HGAFKTMSIE  240
NGNCGVAHLS SESSTIAQSL LSPDLLF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1159165RRSRLRK
2159166RRSRLRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00239DAPTransfer from AT1G75390Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLH9WFT32e-54H9WFT3_PINTA; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP5511678
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.12e-27basic leucine-zipper 42