 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_010109004.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
|
| Family |
GRAS |
| Protein Properties |
Length: 584aa MW: 64099.2 Da PI: 4.7686 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_010109004.1 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 451.6 | 5.2e-138 | 220 | 579 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95
lv++L++cAea+++++l+la++l++++ la++++ +m+++a+yf+eALa+r+++ + p+e ++ ss + + + f+e++P+lkf+h
XP_010109004.1 220 LVHTLMACAEAIQQDNLKLADTLVKHVGLLAASQAGAMRKVATYFAEALARRIYG--------IYPQELQD--SSFADMLQMHFYETCPYLKFAH 304
689****************************************************........45666664..4444445556************ PP
GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
+taNqaIlea+++++rvH+iDf++++GlQWpaL+qaLa Rp+gpp +R+Tg+g+p+s++++ l+++g++La++Ae++gv+fef+ +va++l+dle
XP_010109004.1 305 FTANQAILEAFATSNRVHVIDFGLKEGLQWPALIQALALRPGGPPAFRLTGIGPPQSNNTDPLQQVGWKLAQLAETIGVEFEFRGFVANSLADLE 399
*********************************************************************************************** PP
GRAS 191 leeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
+++L+++p E++aVn+v++lhrll++++s+e+ vL+ +k ++Pk+v++veqea+hn++ Fl+rf+eal+yys+lfdsle + + +
XP_010109004.1 400 PSMLDLQPpeIETVAVNSVFELHRLLARPGSIEK----VLSSIKAVRPKIVTIVEQEANHNGPVFLDRFTEALHYYSTLFDSLEIS---PPSRDL 487
********9999**********************....**********************************************99...456789 PP
GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
++++++lg++i+nvvaceg +r+erhe+l +Wr+r+++aGF v+l+++a kqa++ll+ ++ ++gyrvee++g+l+lgW++rpL+++SaW+
XP_010109004.1 488 MMSEVYLGKQICNVVACEGPDRVERHENLDRWRDRFGSAGFDRVHLGSNAFKQASMLLALYAgGEGYRVEENDGCLMLGWHTRPLIATSAWQ 579
9999***************************************************************************************6 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0006808 | Biological Process | regulation of nitrogen utilization |
| GO:0009723 | Biological Process | response to ethylene |
| GO:0009737 | Biological Process | response to abscisic acid |
| GO:0009863 | Biological Process | salicylic acid mediated signaling pathway |
| GO:0009867 | Biological Process | jasmonic acid mediated signaling pathway |
| GO:0009938 | Biological Process | negative regulation of gibberellic acid mediated signaling pathway |
| GO:0010187 | Biological Process | negative regulation of seed germination |
| GO:0010218 | Biological Process | response to far red light |
| GO:0010233 | Biological Process | phloem transport |
| GO:0042176 | Biological Process | regulation of protein catabolic process |
| GO:0042538 | Biological Process | hyperosmotic salinity response |
| GO:2000033 | Biological Process | regulation of seed dormancy process |
| GO:2000377 | Biological Process | regulation of reactive oxygen species metabolic process |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 584 aa
Download sequence Send
to blast |
MKRDHQDSSA GYGGASNTTI GAPTMKGQGE CSEFTNGKAK MWTQEEEQEA GGMDELLAVL 60
GYKVRSSDMA EVAQKLEQLE MVLGSAQEDG ISQLSDTVHY NPSDLSGWVQ SMLSELNPQI 120
DDNTLLSNNQ TPNTNHNQSH VVFHDDSEYD LRAIPGVAAF PPPRPPPPPS DEQQNAPKRL 180
KTTAAAVSIE SSSSSPLKTE VSESTRAVVL FDSQDAGVRL VHTLMACAEA IQQDNLKLAD 240
TLVKHVGLLA ASQAGAMRKV ATYFAEALAR RIYGIYPQEL QDSSFADMLQ MHFYETCPYL 300
KFAHFTANQA ILEAFATSNR VHVIDFGLKE GLQWPALIQA LALRPGGPPA FRLTGIGPPQ 360
SNNTDPLQQV GWKLAQLAET IGVEFEFRGF VANSLADLEP SMLDLQPPEI ETVAVNSVFE 420
LHRLLARPGS IEKVLSSIKA VRPKIVTIVE QEANHNGPVF LDRFTEALHY YSTLFDSLEI 480
SPPSRDLMMS EVYLGKQICN VVACEGPDRV ERHENLDRWR DRFGSAGFDR VHLGSNAFKQ 540
ASMLLALYAG GEGYRVEEND GCLMLGWHTR PLIATSAWQL ADLG
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Probably acts by participating in large multiprotein complexes that represses transcription of GA-inducible genes. Upon GA application, it is degraded by the proteasome, allowing the GA signaling pathway (By similarity). {ECO:0000250}. |
