PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0358s0019.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | WRKY | ||||||||
Protein Properties | Length: 273aa MW: 30152.8 Da PI: 4.5785 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 36.7 | 8.6e-12 | 203 | 223 | 2 | 22 |
--SS-EEEEEEE--TT-SS-E CS WRKY 2 dDgynWrKYGqKevkgsefpr 22 +Dgy+WrKYGqK vk+s+fpr Kalax.0358s0019.2.p 203 EDGYRWRKYGQKAVKNSPFPR 223 8*******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.4E-12 | 187 | 223 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.7E-9 | 194 | 224 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 13.161 | 197 | 223 | IPR003657 | WRKY domain |
SMART | SM00774 | 3.2E-5 | 202 | 236 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.9E-7 | 203 | 224 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009624 | Biological Process | response to nematode | ||||
GO:0009733 | Biological Process | response to auxin | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 273 aa Download sequence Send to blast |
MMKKEAMESL ISGGSDTSSL CYLDLLGGGA AGYGNLCSMF DGGVVNGAGA DLGFLEMLGV 60 QEFQIPMGYM FDEMAHSGEV MTSSWQAISI DQVPAAGYNN GFVKPMNKRQ QQPLFDDRNN 120 NAPGTPNSSS ISYASNNEGM VVESEQDDKA DEEEDEEEDG DDAEDQKGSG KSKKQLKAKK 180 GKLKKQRQPR IAFMTKSEVD HLEDGYRWRK YGQKAVKNSP FPRYKPTLTP MLTLPSQLFF 240 KNPDDGFYAL QELLPLHQCI LWSEEKSGEI MH* |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00069 | PBM | Transfer from AT2G47260 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18170.1 | 4e-19 | WRKY DNA-binding protein 28 |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0358s0019.2.p |