PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MLOC_62430.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family | bZIP | ||||||||
Protein Properties | Length: 196aa MW: 21449.1 Da PI: 9.5055 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 41.3 | 3.4e-13 | 100 | 159 | 4 | 63 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +r rr+ +NRe+ArrsR RK++++ eL v L + N++L ++l++ +++l ++ MLOC_62430.1 100 ERRRRRMVSNRESARRSRMRKQKQLSELWAQVVHLRGANRQLLDQLNRVIRDCDRLLRDN 159 5899*************************************************9998876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 5.8E-13 | 97 | 161 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 9.9E-10 | 98 | 155 | No hit | No description |
Pfam | PF00170 | 9.6E-11 | 99 | 159 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.496 | 99 | 155 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 6.28E-11 | 101 | 151 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 104 | 119 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 2.24E-13 | 106 | 153 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0042803 | Molecular Function | protein homodimerization activity | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 196 aa Download sequence Send to blast |
MYPAELASVP YLSAAAAISA AFRPHYQVVA PDDLVFPYNG GGLLVPQATS SPSSSSYQQQ 60 QQLLHEAAGG GGLLPPFGAR SSNSDESDGY QQAHCSLAEE RRRRRMVSNR ESARRSRMRK 120 QKQLSELWAQ VVHLRGANRQ LLDQLNRVIR DCDRLLRDNS GLRDERAKLR ERLQQLPAAA 180 AAAVPVEDAA AAAQGC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 100 | 121 | RRRRRMVSNRESARRSRMRKQK |
2 | 113 | 120 | RRSRMRKQ |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00647 | PBM | Transfer from LOC_Os02g49560 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | MLOC_62430.1 |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AJ234839 | 1e-137 | AJ234839.1 Hordeum vulgare genomic DNA fragment; clone MWG2212. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020182325.1 | 2e-92 | basic leucine zipper 63-like | ||||
TrEMBL | A0A287UN49 | 1e-137 | A0A287UN49_HORVV; Uncharacterized protein | ||||
STRING | MLOC_62430.1 | 1e-138 | (Hordeum vulgare) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1186 | 35 | 126 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G38800.1 | 2e-12 | basic leucine-zipper 43 |