PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_10823.4
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family EIL
Protein Properties Length: 609aa    MW: 68013.5 Da    PI: 6.0746
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_10823.4genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN34289.1e-131354151353
                   XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
          EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWke 97 
                   eel +rmwkd+++l+r+ker+++l   ++a+++++k +++++qa rkkm+raQDgiLkYMlk mevcna+GfvYgiipekgkpv+gasd++raWWke
  MLOC_10823.4  35 EELARRMWKDRVRLRRIKEREQRLA-LQQAELEKSKPKQISDQAMRKKMARAQDGILKYMLKLMEVCNARGFVYGIIPEKGKPVSGASDNIRAWWKE 130
                   8********************9865.66777****************************************************************** PP

                   XXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--.-- CS
          EIN3  98 kvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgtpp 194
                   kv+fd+ngpaai+ky+a++l+ ++++s+   + ++ hsl++lqD+tlgSLLs+lmqhc+ppqr++plekg++pPWWP G+e+ww++lgl++ q   p
  MLOC_10823.4 131 KVKFDKNGPAAIAKYEAEHLVDANAQSS---AVKNEHSLMDLQDATLGSLLSSLMQHCNPPQRKYPLEKGTPPPWWPAGNEEWWAALGLPRGQF-AP 223
                   *********************9988777...789**********************************************************99.8* PP

                   ---GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX.XX......XXXXXXXXXXXXXXXXXXX CS
          EIN3 195 ykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah.ss......slrkqspkvtlsceqkedv 284
                   ykkphdlkk+wkv+vLt+vikhmsp++++ir+++r+sk lqdkm+akes ++l vl++ee+++  +    s+         +++  + +s+++++dv
  MLOC_10823.4 224 YKKPHDLKKVWKVGVLTCVIKHMSPNFDKIRNHVRKSKILQDKMTAKESLIWLGVLQREERLVLGIDNGvSEithhsaPEDRNRAMIAHSSSNEYDV 320
                   *************************************************************99887777533554433444477778899999**** PP

                   XXXXXXX.XXXXXXXXXX.............................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXX CS
          EIN3 285 egkkeskikhvqavktta.............................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqn 352
                   +g +e   +++++++++                               ++    +k++p+++++ +s+  +   q+ q ++  +e+ ++d+n+++q 
  MLOC_10823.4 321 DGFEEAPLSTSSKDDEQGlspaaqsseehvsrsgrerantkhvyqavLLK-EGTKKQPPKRKRARHSS--VAVEQEVQRTDDAPENLIPDMNRLDQV 414
                   *888888898888888779999999999***************9874333.34444577777776666..689999999999**********99986 PP

                   X CS
          EIN3 353 e 353
                   e
  MLOC_10823.4 415 E 415
                   5 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048732.5E-12535283No hitNo description
Gene3DG3DSA:1.10.3180.102.5E-67157287IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167688.24E-58163285IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0042762Biological Processregulation of sulfur metabolic process
GO:0071281Biological Processcellular response to iron ion
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 609 aa     Download sequence    Send to blast
MDQLALLATE FGDSSDFEVD GINENDVSDE EIEPEELARR MWKDRVRLRR IKEREQRLAL  60
QQAELEKSKP KQISDQAMRK KMARAQDGIL KYMLKLMEVC NARGFVYGII PEKGKPVSGA  120
SDNIRAWWKE KVKFDKNGPA AIAKYEAEHL VDANAQSSAV KNEHSLMDLQ DATLGSLLSS  180
LMQHCNPPQR KYPLEKGTPP PWWPAGNEEW WAALGLPRGQ FAPYKKPHDL KKVWKVGVLT  240
CVIKHMSPNF DKIRNHVRKS KILQDKMTAK ESLIWLGVLQ REERLVLGID NGVSEITHHS  300
APEDRNRAMI AHSSSNEYDV DGFEEAPLST SSKDDEQGLS PAAQSSEEHV SRSGRERANT  360
KHVYQAVLLK EGTKKQPPKR KRARHSSVAV EQEVQRTDDA PENLIPDMNR LDQVEIPGMA  420
NQITSFNQMA VTSEALQHRG NAQGHVYLPG AGVNSFDNAQ PVDATPVSIY MGDQHVRYGS  480
SDDARSKSGN PFPLHADSGF NSFPSSYQTL PPKQSLPLPM MDHHVVPMGI RAAADNSPYG  540
DHVIGGGNST SVPGDMQHLV DFPFYGEQDK FVGSSFEGLP LDYISMSSPI PDIDDLLLHD  600
DDLMEYLGT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A8e-6316628612132ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00649PBMTransfer from LOC_Os09g31400Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_10823.4
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2495820.0AK249582.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf40h12, mRNA sequence.
GenBankAK3641870.0AK364187.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2022H23.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020187998.10.0ETHYLENE INSENSITIVE 3-like 3 protein
SwissprotO231161e-144EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLF2DJW90.0F2DJW9_HORVV; Predicted protein
STRINGMLOC_10823.10.0(Hordeum vulgare)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.11e-146ETHYLENE-INSENSITIVE3-like 3
Publications ? help Back to Top
  1. Frerigmann H,Gigolashvili T
    Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency.
    Front Plant Sci, 2014. 5: p. 626
    [PMID:25426131]
  2. Zheng ZL,Zhang B,Leustek T
    Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing.
    Front Plant Sci, 2014. 5: p. 710
    [PMID:25566284]
  3. Panda SK,Sunkar R
    Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling.
    Plant Signal Behav, 2015. 10(4): p. e1010916
    [PMID:25912823]
  4. Wawrzyńska A,Sirko A
    EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor.
    Plant Sci., 2016. 253: p. 50-57
    [PMID:27968996]