PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MLOC_10823.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family | EIL | ||||||||
Protein Properties | Length: 609aa MW: 68013.5 Da PI: 6.0746 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 428 | 9.1e-131 | 35 | 415 | 1 | 353 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWke 97 eel +rmwkd+++l+r+ker+++l ++a+++++k +++++qa rkkm+raQDgiLkYMlk mevcna+GfvYgiipekgkpv+gasd++raWWke MLOC_10823.3 35 EELARRMWKDRVRLRRIKEREQRLA-LQQAELEKSKPKQISDQAMRKKMARAQDGILKYMLKLMEVCNARGFVYGIIPEKGKPVSGASDNIRAWWKE 130 8********************9865.66777****************************************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--.-- CS EIN3 98 kvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgtpp 194 kv+fd+ngpaai+ky+a++l+ ++++s+ + ++ hsl++lqD+tlgSLLs+lmqhc+ppqr++plekg++pPWWP G+e+ww++lgl++ q p MLOC_10823.3 131 KVKFDKNGPAAIAKYEAEHLVDANAQSS---AVKNEHSLMDLQDATLGSLLSSLMQHCNPPQRKYPLEKGTPPPWWPAGNEEWWAALGLPRGQF-AP 223 *********************9988777...789**********************************************************99.8* PP ---GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX.XX......XXXXXXXXXXXXXXXXXXX CS EIN3 195 ykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah.ss......slrkqspkvtlsceqkedv 284 ykkphdlkk+wkv+vLt+vikhmsp++++ir+++r+sk lqdkm+akes ++l vl++ee+++ + s+ +++ + +s+++++dv MLOC_10823.3 224 YKKPHDLKKVWKVGVLTCVIKHMSPNFDKIRNHVRKSKILQDKMTAKESLIWLGVLQREERLVLGIDNGvSEithhsaPEDRNRAMIAHSSSNEYDV 320 *************************************************************99887777533554433444477778899999**** PP XXXXXXX.XXXXXXXXXX.............................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXX CS EIN3 285 egkkeskikhvqavktta.............................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqn 352 +g +e +++++++++ ++ +k++p+++++ +s+ + q+ q ++ +e+ ++d+n+++q MLOC_10823.3 321 DGFEEAPLSTSSKDDEQGlspaaqsseehvsrsgrerantkhvyqavLLK-EGTKKQPPKRKRARHSS--VAVEQEVQRTDDAPENLIPDMNRLDQV 414 *888888898888888779999999999***************9874333.34444577777776666..689999999999**********99986 PP X CS EIN3 353 e 353 e MLOC_10823.3 415 E 415 5 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 2.5E-125 | 35 | 283 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 2.5E-67 | 157 | 287 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 8.24E-58 | 163 | 285 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0042762 | Biological Process | regulation of sulfur metabolic process | ||||
GO:0071281 | Biological Process | cellular response to iron ion | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 609 aa Download sequence Send to blast |
MDQLALLATE FGDSSDFEVD GINENDVSDE EIEPEELARR MWKDRVRLRR IKEREQRLAL 60 QQAELEKSKP KQISDQAMRK KMARAQDGIL KYMLKLMEVC NARGFVYGII PEKGKPVSGA 120 SDNIRAWWKE KVKFDKNGPA AIAKYEAEHL VDANAQSSAV KNEHSLMDLQ DATLGSLLSS 180 LMQHCNPPQR KYPLEKGTPP PWWPAGNEEW WAALGLPRGQ FAPYKKPHDL KKVWKVGVLT 240 CVIKHMSPNF DKIRNHVRKS KILQDKMTAK ESLIWLGVLQ REERLVLGID NGVSEITHHS 300 APEDRNRAMI AHSSSNEYDV DGFEEAPLST SSKDDEQGLS PAAQSSEEHV SRSGRERANT 360 KHVYQAVLLK EGTKKQPPKR KRARHSSVAV EQEVQRTDDA PENLIPDMNR LDQVEIPGMA 420 NQITSFNQMA VTSEALQHRG NAQGHVYLPG AGVNSFDNAQ PVDATPVSIY MGDQHVRYGS 480 SDDARSKSGN PFPLHADSGF NSFPSSYQTL PPKQSLPLPM MDHHVVPMGI RAAADNSPYG 540 DHVIGGGNST SVPGDMQHLV DFPFYGEQDK FVGSSFEGLP LDYISMSSPI PDIDDLLLHD 600 DDLMEYLGT |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wij_A | 8e-63 | 166 | 286 | 12 | 132 | ETHYLENE-INSENSITIVE3-like 3 protein |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00649 | PBM | Transfer from LOC_Os09g31400 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | MLOC_10823.3 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK249582 | 0.0 | AK249582.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf40h12, mRNA sequence. | |||
GenBank | AK364187 | 0.0 | AK364187.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2022H23. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020187998.1 | 0.0 | ETHYLENE INSENSITIVE 3-like 3 protein | ||||
Swissprot | O23116 | 1e-144 | EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein | ||||
TrEMBL | F2DJW9 | 0.0 | F2DJW9_HORVV; Predicted protein | ||||
STRING | MLOC_10823.1 | 0.0 | (Hordeum vulgare) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G73730.1 | 1e-146 | ETHYLENE-INSENSITIVE3-like 3 |
Publications ? help Back to Top | |||
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