PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462936109
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family EIL
Protein Properties Length: 613aa    MW: 68225.8 Da    PI: 6.2138
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462936109genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3423.32.5e-129384171351
                XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgak.ksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWkekv 99 
                e l +rmwkd+++lkr+ker++ l   ++++++++ + +  ++qa rkkmsraQDgiLkYM+k mevcna+GfvYgiip+kgkpv+gasd++raWWkekv
  462936109  38 EQLARRMWKDRVRLKRIKERQQMLA-LQQVELEKSrQLKPVSDQAMRKKMSRAQDGILKYMIKLMEVCNARGFVYGIIPDKGKPVSGASDNIRAWWKEKV 136
                6789*****************9866.5555555440445789********************************************************** PP

                XXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--.-----GG CS
       EIN3 100 efdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgtppykkph 199
                +fd+ngpaai+ky+++n+++++++s    + ++ hsl++lqD+tlgSLLs+lmqhc+ppqr++plekg++pPWWP+G+e ww  lgl++ q  ppykkph
  462936109 137 KFDKNGPAAIAKYESENMVVDNAHSG---GVKNHHSLMDLQDATLGSLLSSLMQHCNPPQRKYPLEKGTPPPWWPSGNEGWWIDLGLPTGQV-PPYKKPH 232
                *********************99999...88**********************************************************999.9****** PP

                G--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX.XX....XXXXXXXXXXXXXXXXXXXXXXXXXX.XX CS
       EIN3 200 dlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah.ss....slrkqspkvtlsceqkedvegkkeskikh 294
                dlkk+wkv+vLt vikhmsp++++ir+++r+sk+lqdkm+akes ++l vl++ee++++++     +    s+ ++ +  t+s+++++dv+g ++   ++
  462936109 233 DLKKVWKVGVLTGVIKHMSPNFDKIRNHVRKSKCLQDKMTAKESLIWLGVLQREEQLVHRIDNPvLEityhSVAEGGNGQTYSSSNEYDVDGFEDAPLSA 332
                **********************************************************99998863356679999****************777777788 PP

                XXXXXXXX.................................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXX CS
       EIN3 295 vqavktta.................................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisq 351
                ++++++++                                 g++   krk+ +++s+ ++ +      q+      +++++++d+n+++q
  462936109 333 SSKDDEQNlspvaqsteehapkrgrekaynkrpnqivpykaGTKEPPKRKRARGSSTVIEPE-----AQRIDNGPDNSRHMIPDMNRLDQ 417
                88888888899999999999999999999999999999999999999999999999998877.....34444444567778888887776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048733.8E-12439287No hitNo description
Gene3DG3DSA:1.10.3180.103.0E-69163293IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167681.07E-60167290IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0042762Biological Processregulation of sulfur metabolic process
GO:0071281Biological Processcellular response to iron ion
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 613 aa     Download sequence    Send to blast
MEQLALIAAE LGDSSDFEVE GIQNLTENDV SDEEIEPEQL ARRMWKDRVR LKRIKERQQM  60
LALQQVELEK SRQLKPVSDQ AMRKKMSRAQ DGILKYMIKL MEVCNARGFV YGIIPDKGKP  120
VSGASDNIRA WWKEKVKFDK NGPAAIAKYE SENMVVDNAH SGGVKNHHSL MDLQDATLGS  180
LLSSLMQHCN PPQRKYPLEK GTPPPWWPSG NEGWWIDLGL PTGQVPPYKK PHDLKKVWKV  240
GVLTGVIKHM SPNFDKIRNH VRKSKCLQDK MTAKESLIWL GVLQREEQLV HRIDNPVLEI  300
TYHSVAEGGN GQTYSSSNEY DVDGFEDAPL SASSKDDEQN LSPVAQSTEE HAPKRGREKA  360
YNKRPNQIVP YKAGTKEPPK RKRARGSSTV IEPEAQRIDN GPDNSRHMIP DMNRLDQLEI  420
PGMANQIVSF NHGGNTSDAF QHRGDAQVQV HLPGAEVNSF GNTQAANAAP VSIYIGGQHL  480
PYLNSDSARS KSGNTFPVDA DTGLNNLPNG YQTLPQKQPV PLSMMDHHVV PMGARAPADN  540
SPYGDHIIGG GNSTSVPGDI QPLIDYPFYV EQDKFVGSSF EGLPMDYISI SSPIPDIDDL  600
LLHDDDLMEY LGT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A2e-6417029212134ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00649PBMTransfer from LOC_Os09g31400Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMap462936109
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025800640.10.0ETHYLENE INSENSITIVE 3-like 3 protein
RefseqXP_025800641.10.0ETHYLENE INSENSITIVE 3-like 3 protein
RefseqXP_025800642.10.0ETHYLENE INSENSITIVE 3-like 3 protein
SwissprotO231161e-139EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLA0A0A9DKK80.0A0A0A9DKK8_ARUDO; Uncharacterized protein
STRINGSi029258m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37203779
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.11e-141ETHYLENE-INSENSITIVE3-like 3
Publications ? help Back to Top
  1. Frerigmann H,Gigolashvili T
    Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency.
    Front Plant Sci, 2014. 5: p. 626
    [PMID:25426131]
  2. Zheng ZL,Zhang B,Leustek T
    Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing.
    Front Plant Sci, 2014. 5: p. 710
    [PMID:25566284]
  3. Panda SK,Sunkar R
    Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling.
    Plant Signal Behav, 2015. 10(4): p. e1010916
    [PMID:25912823]
  4. Wawrzyńska A,Sirko A
    EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor.
    Plant Sci., 2016. 253: p. 50-57
    [PMID:27968996]