PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010927984.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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Family | bZIP | ||||||||
Protein Properties | Length: 170aa MW: 19618.1 Da PI: 8.5471 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 36.3 | 1.2e-11 | 83 | 134 | 4 | 55 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 +r rr+ +NRe+ArrsR RK++ + eL v L + N++L ++l++ XP_010927984.1 83 ERRKRRMLSNRESARRSRIRKQKHLNELSLQVFHLRTANRQLLDQLNHVMRD 134 6899***************************************999987765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 3.0E-9 | 79 | 132 | No hit | No description |
SMART | SM00338 | 1.5E-12 | 80 | 144 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.806 | 82 | 145 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.1E-9 | 82 | 141 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.25E-11 | 84 | 133 | No hit | No description |
CDD | cd14702 | 3.84E-15 | 85 | 133 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 87 | 102 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 170 aa Download sequence Send to blast |
MQPGEVASIR YVAPMHPPSF GPHFNMAQNS IPSFHFSSLF GPYAMQQVQT IPLIHEVGLP 60 SSCLSNNSTS DEGEEHQPSL AEERRKRRML SNRESARRSR IRKQKHLNEL SLQVFHLRTA 120 NRQLLDQLNH VMRDRDQILH ENAQLRDEES ELRKKLENLL MENTSSAPLT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 83 | 104 | RRKRRMLSNRESARRSRIRKQK |
2 | 96 | 103 | RRSRIRKQ |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00647 | PBM | Transfer from LOC_Os02g49560 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010927984.1 | 1e-122 | basic leucine zipper 43-like | ||||
TrEMBL | A0A2H3YW69 | 4e-86 | A0A2H3YW69_PHODC; basic leucine zipper 43-like | ||||
STRING | XP_008807020.1 | 1e-103 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1186 | 35 | 126 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G30530.1 | 5e-30 | basic leucine-zipper 42 |