PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Do019246.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
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Family | EIL | ||||||||
Protein Properties | Length: 641aa MW: 71500 Da PI: 4.8282 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 511.3 | 4.6e-156 | 78 | 467 | 1 | 354 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX......XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaa.....tgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraW 94 eel++rmw+d+m+lkrl+e ++++ +d a +++k ++s+eqarrkkmsraQDgiLkYMlk+mevc+aqGfvYgiipekgkpv+gasd+LraW Do019246.1 78 EELERRMWRDRMKLKRLRELQQSRGKDSAAGgggvgDSSSKPRQSQEQARRKKMSRAQDGILKYMLKMMEVCRAQGFVYGIIPEKGKPVSGASDNLRAW 176 8*********************998777666888665677888******************************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--.- CS EIN3 95 WkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgtp 193 Wkekv+fdrngpaai+kyqa+n++++ e++l t + +++hsl+elqDTtlgSLLsalmqhcdppqrr+plekgv+pPWWPtG+e+ww+elg++kdqg+p Do019246.1 177 WKEKVRFDRNGPAAIAKYQADNAVPGAENELAT-GAASPHSLQELQDTTLGSLLSALMQHCDPPQRRYPLEKGVPPPWWPTGEEEWWPELGIPKDQGPP 274 *******************************77.***************************************************************** PP ----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX..XXXX...XXXXXXXXXXXXXXXXXX CS EIN3 194 pykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss..slrk...qspkvtlsceqkedvegk 287 pykkphdlkkawkvsvLtavikhmsp+ie+ir+l+rqsk+lqdkm+ake ++l+v++qee+++ ++++ + s++ ++ ++++s ++++dv+ Do019246.1 275 PYKKPHDLKKAWKVSVLTAVIKHMSPDIEKIRRLVRQSKCLQDKMTAKEISTWLAVVKQEEELYLKLHPGAHplSSTGgiaSAISFNAS-SSEYDVDIA 372 ********************************************************************994423222234245555555.5599***99 PP XXXX.XXXXXXXXXX............................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXXX CS EIN3 288 keskikhvqavktta............................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqney 354 +e k ++ ++kt+ ++++++kr+++ + + + ++ ++tc++ q+++++++ +f d+n++++++y Do019246.1 373 DECKGDEAGNQKTAIadptafnlgaailsdkflmptpmkeetaDVEFIQKRNAPAAAEPELMLNNRVYTCNNVQCPHNDYSYGFLDRNARNSHQY 467 99998888888876689999********************************987665555555567**************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 3.0E-132 | 78 | 335 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 1.7E-74 | 210 | 343 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 1.83E-61 | 214 | 338 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0001666 | Biological Process | response to hypoxia | ||||
GO:0009873 | Biological Process | ethylene-activated signaling pathway | ||||
GO:0042742 | Biological Process | defense response to bacterium | ||||
GO:0071281 | Biological Process | cellular response to iron ion | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0000976 | Molecular Function | transcription regulatory region sequence-specific DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 641 aa Download sequence Send to blast |
MMGGGLMMDH GMVFPGVHNF VDLLQQNGDK NLGFGSLMPQ TSSGDQCLMG EGDLVDPPPE 60 SFPDAGEDDS DDDVEDIEEL ERRMWRDRMK LKRLRELQQS RGKDSAAGGG GVGDSSSKPR 120 QSQEQARRKK MSRAQDGILK YMLKMMEVCR AQGFVYGIIP EKGKPVSGAS DNLRAWWKEK 180 VRFDRNGPAA IAKYQADNAV PGAENELATG AASPHSLQEL QDTTLGSLLS ALMQHCDPPQ 240 RRYPLEKGVP PPWWPTGEEE WWPELGIPKD QGPPPYKKPH DLKKAWKVSV LTAVIKHMSP 300 DIEKIRRLVR QSKCLQDKMT AKEISTWLAV VKQEEELYLK LHPGAHPLSS TGGIASAISF 360 NASSSEYDVD IADECKGDEA GNQKTAIADP TAFNLGAAIL SDKFLMPTPM KEETADVEFI 420 QKRNAPAAAE PELMLNNRVY TCNNVQCPHN DYSYGFLDRN ARNSHQYTCK YNDPLPQSTE 480 NKPQPPQSQA FQGGFNQPNQ ALNNLDFSLP MDGQRSIAEL MNMYDNNFMT NKNMSSDSVT 540 IMERPNAQRM QVDDGFFEQG NGVFDDVNSM MQQPQQAPVQ QQQQQQQPQQ FFIRDDAPFG 600 SQMGDITGTS EFRFGSSFNI SSTVDYPGAA QQKNDGPNWY Y |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 1e-74 | 212 | 343 | 1 | 132 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 1e-74 | 212 | 343 | 1 | 132 | Protein ETHYLENE INSENSITIVE 3 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor acting as a positive regulator in the ethylene response pathway (PubMed:16786297, PubMed:28829777, PubMed:27701783, PubMed:25995326). Required for the inhibition of root growth by ethylene in etiolated seedlings (PubMed:25995326, PubMed:28829777). Functions upstream of the auxin biosynthetic gene YUCCA8 and directly activates its expression (PubMed:28829777). Functions downstream of the ethylene signaling factor EIN2 in disease resistance against the rice blast fungus (Magnaporthe oryzae) (PubMed:27701783). Binds directly to the promoters of the NADPH oxidases RBOHA and RBOHB, and the jasmonate biosynthetic gene OPR4 to activate their expression during fungal infection (PubMed:27701783). May enhance disease resistance by facilitating reactive oxygen species (ROS) generation and jasmonate biosynthesis with subsequent phytoalexin accumulation during Magnaporthe oryzae infection (PubMed:27701783). Acts as negative regulator of salt tolerance (PubMed:25995326). During salt stress, activates the cation transporter HKT1, which mediates increased sodium uptake in roots, and contributes to sodium accumulation and salt toxicity (PubMed:25995326). Binds directly to the DNA sequence 5'-TGTTACAAATACC-3' in the promoter of the GA20OX2 gene to activate its expression at the transcriptional level during ethylene signaling (PubMed:30002253). Possesses transactivation activity in protoplasts (PubMed:25995326). {ECO:0000269|PubMed:16786297, ECO:0000269|PubMed:25995326, ECO:0000269|PubMed:27701783, ECO:0000269|PubMed:28829777, ECO:0000269|PubMed:30002253}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00367 | DAP | Transfer from AT3G20770 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Do019246.1 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by infection with the fungal pathogen Magnaporthe oryzae. {ECO:0000269|PubMed:27701783}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004984528.1 | 0.0 | ETHYLENE INSENSITIVE 3-like 1 protein | ||||
Swissprot | Q10M41 | 0.0 | EIL1A_ORYSJ; Protein ETHYLENE-INSENSITIVE 3-like 1a | ||||
TrEMBL | A0A1E5V4Z5 | 0.0 | A0A1E5V4Z5_9POAL; ETHYLENE INSENSITIVE 3-like 1 protein | ||||
STRING | Si034617m | 0.0 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP638 | 38 | 168 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G27050.1 | 1e-148 | ETHYLENE-INSENSITIVE3-like 1 |
Publications ? help Back to Top | |||
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