PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV51952.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | ERF | ||||||||
Protein Properties | Length: 197aa MW: 22140.8 Da PI: 10.7257 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.5 | 1.1e-20 | 21 | 71 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +++GVr ++ +gr++AeIrdp gk+ r++lg+f+taeeAa+a+++a+++++g+ KZV51952.1 21 HFRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDEAARQFRGH 71 58*******.**********8...557*************************997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00380 | 2.5E-38 | 21 | 84 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 1.9E-14 | 21 | 71 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.96E-22 | 21 | 78 | IPR016177 | DNA-binding domain |
CDD | cd00018 | 9.69E-32 | 21 | 78 | No hit | No description |
Gene3D | G3DSA:3.30.730.10 | 6.6E-33 | 21 | 78 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 23.525 | 21 | 78 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.7E-11 | 22 | 33 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.7E-11 | 44 | 60 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009723 | Biological Process | response to ethylene | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:0009864 | Biological Process | induced systemic resistance, jasmonic acid mediated signaling pathway | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated | ||||
GO:0016020 | Cellular Component | membrane | ||||
GO:0016604 | Cellular Component | nuclear body | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence Send to blast |
MAPRARAAAA LGVRRGDDEM HFRGVRKRPW GRYAAEIRDP GKKSRVWLGT FDTAEEAARA 60 YDEAARQFRG HKAKTNFPPP DSIAQKTSNR SPSQSSTVES SSREAVPPPL DLTLGRRPMR 120 FPFQNNLHLL PPVTSYKPEH TTMLHLGPES RREIADLMNQ FRRVPVDFFH SGSDSDTSTQ 180 HGRVLNLDLN LPPSETS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1gcc_A | 4e-21 | 21 | 78 | 2 | 60 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
2gcc_A | 4e-21 | 21 | 78 | 5 | 63 | ATERF1 |
3gcc_A | 4e-21 | 21 | 78 | 5 | 63 | ATERF1 |
5wx9_A | 6e-21 | 16 | 78 | 9 | 72 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00358 | DAP | Transfer from AT3G15210 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV51952.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020553968.1 | 1e-67 | ethylene-responsive transcription factor 4-like | ||||
TrEMBL | A0A2Z7CXV5 | 1e-142 | A0A2Z7CXV5_9LAMI; Uncharacterized protein | ||||
STRING | PGSC0003DMT400058751 | 9e-47 | (Solanum tuberosum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA21 | 24 | 1165 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44210.1 | 1e-26 | erf domain protein 9 |