PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | DCAR_007210 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
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Family | bZIP | ||||||||
Protein Properties | Length: 200aa MW: 22747.3 Da PI: 6.509 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 45.1 | 2.2e-14 | 85 | 132 | 5 | 52 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 ++ rr+++NRe+ArrsR RK++ ++eL v L +eN++L ++l++ DCAR_007210 85 RKKRRMISNRESARRSRMRKQKHLDELWSQVVRLRTENHDLLDKLNNV 132 6789**************************************999986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 8.7E-15 | 81 | 145 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.622 | 83 | 146 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 9.14E-13 | 85 | 133 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 4.7E-12 | 85 | 158 | No hit | No description |
Pfam | PF00170 | 3.0E-12 | 85 | 132 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 3.60E-20 | 86 | 133 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 88 | 103 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence Send to blast |
MMFPSEFAGI QTLAQDTPSH FENNCGIIQS DMSTLNYFNN LLANYPNLQN SLLPVYDFNS 60 QSSGFSNNST SDEGDEFQLS IINERKKRRM ISNRESARRS RMRKQKHLDE LWSQVVRLRT 120 ENHDLLDKLN NVSGDHDRVV QENARLKKEA SDLRQMLTEL QLASTYSGLR DLEEVPCTTA 180 HLRTGSSNHC VTSSPVCFN* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 84 | 105 | RKKRRMISNRESARRSRMRKQK |
2 | 97 | 104 | RRSRMRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00647 | PBM | Transfer from LOC_Os02g49560 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017234174.1 | 1e-148 | PREDICTED: basic leucine zipper 43-like | ||||
Swissprot | Q9FMC2 | 3e-36 | BZP43_ARATH; Basic leucine zipper 43 | ||||
TrEMBL | A0A162AV95 | 1e-146 | A0A162AV95_DAUCS; Uncharacterized protein | ||||
STRING | cassava4.1_022183m | 5e-75 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA947 | 24 | 92 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G30530.1 | 1e-42 | basic leucine-zipper 42 |
Link Out ? help Back to Top | |
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Phytozome | DCAR_007210 |
Publications ? help Back to Top | |||
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