PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G051800.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family TCP
Protein Properties Length: 420aa    MW: 44692.1 Da    PI: 6.3547
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G051800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP117.81.4e-361042033102
                TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgkaaksa 94 
                        +++ +++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti WLl+ a+pai+++tgt++ +a +++ +   +   ++s+++ a+++
  Aqcoe7G051800.1.p 104 ARRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMSVGGTLKIPTTPSNPETAADT 195
                        6899***********************************************************77777444222222222223333333333 PP

                TCP  95 akskksqk 102
                        +k+k+++ 
  Aqcoe7G051800.1.p 196 TKKKRKRP 203
                        33333322 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036341.4E-29108183IPR005333Transcription factor, TCP
PROSITE profilePS5136927.141109163IPR017887Transcription factor TCP subgroup
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008361Biological Processregulation of cell size
GO:0048364Biological Processroot development
GO:1900056Biological Processnegative regulation of leaf senescence
GO:0005634Cellular Componentnucleus
Sequence ? help Back to Top
Protein Sequence    Length: 420 aa     Download sequence    Send to blast
MDLIHKQELE EDEDGGFTDL RINGVGNEEM FGNNGSEAEE DDNLYADEQT HGKIGMCLKK  60
EPTETGQVFQ DHEQQQQQQQ HMGVLPVIPI PMQQMQVRKP TTQARRASTK DRHTKVEGRG  120
RRIRMPATCA ARIFQLTREL GHKSDGETIR WLLEHAEPAI IAATGTGTVP AIAMSVGGTL  180
KIPTTPSNPE TAADTTKKKR KRPVTSEFFD PNENNDGVSI SSGLAPIQAA NHQIAAAAAT  240
TAVPQGLVPM WALGSGGNLI SSNGAFWMIP PTATAIAGPS NQPQLWAFQP TTVTPLVNIS  300
ARPISSFVST MQPGPGGGGG VTLAPTSIEV QQPSPSSSLP PSLSSSITNN SSTTSALGAK  360
PAKPSTMAPS STSVTTTTTT AATQLLTDFS LEIYEKQELQ FMGHSTKHRQ QDQPTTPSK*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00667PBMTransfer from GSVIVG01027588001Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010255575.11e-129PREDICTED: transcription factor TCP9
SwissprotO646474e-74TCP9_ARATH; Transcription factor TCP9
TrEMBLA0A2G5E1S70.0A0A2G5E1S7_AQUCA; Uncharacterized protein
STRINGAquca_013_00460.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45680.11e-59TCP family protein