PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zpz_sc00363.1.g00140.1.am.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | bZIP | ||||||||
Protein Properties | Length: 132aa MW: 15536.3 Da PI: 8.5251 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 42.3 | 1.6e-13 | 42 | 101 | 4 | 63 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +r rr+++NRe+ArrsR RK++++ eL v L + N++L ++l++ ++++ e+ Zpz_sc00363.1.g00140.1.am.mk 42 ERRRRRMISNRESARRSRMRKQKQLSELWAQVVHLRSTNRQLLDQLNHVIRDCERVLHEN 101 6899*********************************************99999988876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 8.4E-11 | 39 | 96 | No hit | No description |
SMART | SM00338 | 1.2E-14 | 39 | 103 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.7E-10 | 41 | 96 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.703 | 41 | 104 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.44E-12 | 43 | 93 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 46 | 61 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 1.92E-12 | 48 | 88 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 132 aa Download sequence Send to blast |
MLAPHPTSYQ DVAQLVHEAS FHVGNKSNSD ESDDYQRSLA EERRRRRMIS NRESARRSRM 60 RKQKQLSELW AQVVHLRSTN RQLLDQLNHV IRDCERVLHE NSQLRDEQTK LQKQLEKLPE 120 VTTEASDMGT DS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 42 | 63 | RRRRRMISNRESARRSRMRKQK |
2 | 55 | 62 | RRSRMRKQ |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00647 | PBM | Transfer from LOC_Os02g49560 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Zpz_sc00363.1.g00140.1.am.mk |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK289027 | 4e-96 | AK289027.1 Oryza sativa Japonica Group cDNA, clone: J090090L02, full insert sequence. | |||
GenBank | AP005284 | 4e-96 | AP005284.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, BAC clone:B1121A12. | |||
GenBank | AP014958 | 4e-96 | AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence. | |||
GenBank | CP012610 | 4e-96 | CP012610.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 2 sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004953778.1 | 1e-76 | basic leucine zipper 8 | ||||
TrEMBL | A0A3L6RPG1 | 2e-76 | A0A3L6RPG1_PANMI; Basic leucine zipper 43 | ||||
STRING | Si019897m | 4e-76 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1186 | 35 | 126 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G38800.1 | 9e-15 | basic leucine-zipper 43 |