PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00024224-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family WRKY
Protein Properties Length: 586aa    MW: 64322.7 Da    PI: 6.7213
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00024224-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY102.32.7e-32261317360
                         -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
                WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                         DgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkve s  d++++ei+Y+g+Hnh+k
  WALNUT_00024224-RA 261 DGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVEMSL-DGQITEIVYKGSHNHPK 317
                         9***************************************.***************85 PP
2WRKY105.82.3e-33432490159
                         ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                         ldDgy+WrKYGqK+vkg+++prsYY+Ct+++Cpv+k+ver+++d ++v++tYeg+Hnh+
  WALNUT_00024224-RA 432 LDDGYRWRKYGQKVVKGNPNPRSYYKCTYPECPVRKHVERASHDLRAVITTYEGKHNHD 490
                         59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.3E-27251318IPR003657WRKY domain
PROSITE profilePS5081122.492254318IPR003657WRKY domain
SMARTSM007747.5E-35259317IPR003657WRKY domain
SuperFamilySSF1182907.98E-25259318IPR003657WRKY domain
PfamPF031068.7E-25261316IPR003657WRKY domain
Gene3DG3DSA:2.20.25.804.9E-37417492IPR003657WRKY domain
SuperFamilySSF1182903.92E-29424492IPR003657WRKY domain
PROSITE profilePS5081137427492IPR003657WRKY domain
SMARTSM007741.7E-38432491IPR003657WRKY domain
PfamPF031061.8E-25433490IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009409Biological Processresponse to cold
GO:0009651Biological Processresponse to salt stress
GO:0070370Biological Processcellular heat acclimation
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 586 aa     Download sequence    Send to blast
MASSSGSLDT SANSQQSSFT FSTTDHHPFM TSSFSDLLAS AYYDENQNNN TAGTENNKHR  60
GLSDRVAERT GSGVPKFKST PPPSLPISPP SVSPSSYFAI PAGLSPAELL DSPVLLNSYN  120
ILPSPTTGTF PAQAFDWKSN FGNNQQNVKK EDNNYDFSFP TQQRPPLSSS ATNFQSSNTT  180
IQTAQQQAWS FQDPSKQADF SSGKKSTVKH EFGSLQSSQS YSPEIATIQT NNTQSNNNGG  240
FQSDYGSCHQ QAQSLSKKSG DGYNWRKYGQ KQVKGSENPR SYYKCTYPNC PTKKKVEMSL  300
DGQITEIVYK GSHNHPKPQS TRRSSSSSAS SHSIQASNSA PTEIPDQSLA THGNGHMDSV  360
GTPENSSISM GDEDFDQNSQ KCKSGGDDFD EDEPNAKRWK QEGENEGLSV AGSRTVREPR  420
VVVQTTSDID ILDDGYRWRK YGQKVVKGNP NPRSYYKCTY PECPVRKHVE RASHDLRAVI  480
TTYEGKHNHD VPAARGSGSH SNRPLQSSNN NNNNIAATAA FRPRLPTSEG QAPFTLEMLQ  540
SPGSHGFSGF ENAIDSYMNQ PQDTDNVYSR AKEEPRDDLF FESLLA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A3e-36261493878Probable WRKY transcription factor 4
2lex_A3e-36261493878Probable WRKY transcription factor 4
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00282DAPTransfer from AT2G30250Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018816338.10.0PREDICTED: WRKY transcription factor WRKY24-like
TrEMBLA0A2I4EAB50.0A0A2I4EAB5_JUGRE; WRKY transcription factor WRKY24-like
STRINGXP_008231402.10.0(Prunus mume)
STRINGEMJ094890.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF107734114
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38470.11e-108WRKY DNA-binding protein 33