PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC05G10020.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 326aa    MW: 34049.8 Da    PI: 5.8648
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC05G10020.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY74.31.5e-23120181159
                      ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                      ldDg +WrKYGqKe+++s++p++Y+rCt++    C+++++v+r+++dp    +tY geH+++
  OPUNC05G10020.1 120 LDDGQAWRKYGQKEIQNSKHPKAYFRCTHKydqLCMAQRQVQRCDDDPASYRVTYIGEHTCR 181
                      58***************************98878*************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.806.7E-25107181IPR003657WRKY domain
PROSITE profilePS5081119.726115178IPR003657WRKY domain
SuperFamilySSF1182903.27E-23118181IPR003657WRKY domain
SMARTSM007742.4E-35120182IPR003657WRKY domain
PfamPF031062.9E-22121181IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009862Biological Processsystemic acquired resistance, salicylic acid mediated signaling pathway
GO:0009864Biological Processinduced systemic resistance, jasmonic acid mediated signaling pathway
GO:0010200Biological Processresponse to chitin
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:1900056Biological Processnegative regulation of leaf senescence
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    Send to blast
MTSSMAPALP PYAQVMEDME KGQELAAQLQ GLLRDSPEAG RIVDQILHTL SRAMRALDKA  60
VSVAGGEGSE VQSEVTCGGG ASSGGKRKAS AGGGAGADRR ANCRRRTQQS SGKTVVVKNL  120
DDGQAWRKYG QKEIQNSKHP KAYFRCTHKY DQLCMAQRQV QRCDDDPASY RVTYIGEHTC  180
RDLATAPIAA HVIHQVATGD DDDVGGGLHA GSRLISFVAA PARDAAAAAA PTTSTTNTVT  240
APGRLLQPLK VEGGVGSSDQ EEVLSSLTPG SSGARGGGGG VGAGPFGPDQ GDVTSSLHWS  300
YDAIAGMEFF KDDEGVFDLL DDFLLG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A3e-45114181269OsWRKY45
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00408DAPTransfer from AT3G56400Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0662550.0AK066255.1 Oryza sativa Japonica Group cDNA clone:J013058O04, full insert sequence.
GenBankAK1039590.0AK103959.1 Oryza sativa Japonica Group cDNA clone:001-015-C02, full insert sequence.
GenBankAY8706110.0AY870611.1 Oryza sativa (japonica cultivar-group) WRKY45 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015637594.11e-173probable WRKY transcription factor 70
TrEMBLA0A0E0L1060.0A0A0E0L106_ORYPU; Uncharacterized protein
STRINGOPUNC05G10020.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP76563549
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.13e-25WRKY DNA-binding protein 46