PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.K00336.1.p
Common NameLOC105964156, MIMGU_mgv1a007474mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bHLH
Protein Properties Length: 407aa    MW: 42636.5 Da    PI: 6.854
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.K00336.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.81.4e-11227272555
                       HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       h+++Er RR+ri +++  L+el+P+a      K +Ka++L + ++Y+k Lq
  Migut.K00336.1.p 227 HSIAERLRRERIAERMKGLQELVPNA-----NKTDKASMLDEIIDYVKFLQ 272
                       99***********************8.....6******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.83E-16220281IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.74E-12220276No hitNo description
PROSITE profilePS5088816.964222271IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-15224281IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.1E-9227272IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.3E-13228277IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0048767Biological Processroot hair elongation
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 407 aa     Download sequence    Send to blast
MRQPIREREL PGMNSMNSVL NQHQILSLEE IHNHGQSQMF PSSSFDPASS HDDFLEQILS  60
SVSSSAAASS FPWAEDQPAS GMVANLEEQS AALASKMRQQ QIGNGGAAAA KTLMLQQQLL  120
LARGLAAGNE NLPHSDYNDA VDGPSSNYAN LANDASIKAL LNGFTGSLGQ TSNQSQHFHH  180
SQRGAMQQSE NFGAPAAPAL SQPAASGSAG QPRQRVRARR GQATDPHSIA ERLRRERIAE  240
RMKGLQELVP NANKTDKASM LDEIIDYVKF LQLQVKVLSM SRLGGAAAAS PLLANKSHEG  300
RGGKGAHTAA SSSSNKNEGA TVAEQQVAKL MEEDMGSAMQ YLQGKGLCLM PISLATAIST  360
ATGHSRNPLL HGGEAGGPLS PSLSALTVQS ATMGGGDGSL KDTAAE*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1231236RLRRER
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00659PBMTransfer from Pp3c14_15890Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.K00336.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150358e-32AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012844123.10.0PREDICTED: transcription factor bHLH66-like isoform X1
TrEMBLA0A022QYY50.0A0A022QYY5_ERYGU; Uncharacterized protein
STRINGMigut.K00336.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA37592445
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24260.11e-67LJRHL1-like 1