PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn170171 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | bZIP | ||||||||
Protein Properties | Length: 189aa MW: 21846.3 Da PI: 6.0863 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 46.8 | 6.4e-15 | 74 | 124 | 5 | 55 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 +++rr+++NRe+ArrsR RK++ ++eL v L +eN+ L+++l++ ++ Achn170171 74 RKQRRMISNRESARRSRMRKQKHLDELWAQVVRLRNENHNLIDKLNNVSES 124 79****************************************999998775 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 8.8E-16 | 70 | 134 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.967 | 72 | 135 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.3E-12 | 74 | 147 | No hit | No description |
SuperFamily | SSF57959 | 1.19E-12 | 74 | 123 | No hit | No description |
Pfam | PF00170 | 2.0E-12 | 74 | 128 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 5.07E-20 | 75 | 126 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 77 | 92 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 189 aa Download sequence Send to blast |
MLPSEVAAIH YLASDNSSQF PTTFSMMPNN MPPFHFSRFL TQLPNTLHEF TPCLSNNSTS 60 DEAEEQQLNI IDERKQRRMI SNRESARRSR MRKQKHLDEL WAQVVRLRNE NHNLIDKLNN 120 VSESHDRVVQ ENSRLKEEAS DLRQMLTDLQ IGSPYPDLRD LEEVNCNTAH LRSESSDQSI 180 TTSTNLLH* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 86 | 93 | RRSRMRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00647 | PBM | Transfer from LOC_Os02g49560 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027095835.1 | 2e-95 | basic leucine zipper 43-like | ||||
Swissprot | Q9FMC2 | 6e-41 | BZP43_ARATH; Basic leucine zipper 43 | ||||
TrEMBL | A0A2R6PB57 | 1e-135 | A0A2R6PB57_ACTCH; Basic leucine zipper like | ||||
STRING | XP_009611005.1 | 4e-90 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA947 | 24 | 92 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G30530.1 | 7e-52 | basic leucine-zipper 42 |
Publications ? help Back to Top | |||
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