PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM4057
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Subtree rooted at node 92: /----- XP_010550406.1 [Tarenaya hassleriana] (2) /-------------------100------------------+ | \----- XP_010547468.1 [Tarenaya hassleriana] (21) | | /------------------------------- KFK30283.1 [Arabis alpina] (3) | | | | /----- XP_013589725.1 [Brassica oleracea] (10) | | /---------100--------+ | /-100+ | \----- XP_009143303.1 [Brassica rapa] (30) | | | | | | | | /----- Araha.18319s0008.1.p [Arabidopsis halleri] (18) | | | | /-99-+ | | \-81-+ | \----- 490976 [Arabidopsis lyrata] (31) | | | /-100+ | | | | \---------- AT4G36620.1 [Arabidopsis thaliana] (32) | /-100+ | /-100-+ /-100-+ | | | | \--------------- Bostr.7867s1518.1.p [Boechera stricta] (45) | | | | \-100+ | | | | \--------------------- Thhalv10027520m [Eutrema salsugineum] (44) | | | | | | | | /----- RrC10994_p1 [Raphanus raphanistrum] (12) | | | \--------------93--------------+ | | | \----- GSBRNA2T00100129001 [Brassica napus] (48) | | | | | | /----- Cotton_A_14650_BGI-A2_v1.0 [Gossypium arboreum] (5) | | | /-100+ | | | | \----- Gh_A11G1696 [Gossypium hirsutum] (33) | | | | | | | /-100+---------- Gorai.007G202900.1 [Gossypium raimondii] (51) | | | | | | \-99-+ | \---------- Gh_D11G1854 [Gossypium hirsutum] (54) | | | | | /--72-+ /----- Gorai.008G067800.1 [Gossypium raimondii] (22) | | | | /-100+ | | | | | \----- Gh_D12G0610 [Gossypium hirsutum] (52) /-90-+ | | \-100+ | | | | | /----- Cotton_A_14777_BGI-A2_v1.0 [Gossypium arboreum] (25) | | | | \-59-+ | | | /-100+ \----- Gh_A12G0598 [Gossypium hirsutum] (35) | | | | | | | | | | /--------------- Thecc1EG000376t1 [Theobroma cacao] (7) | | | | | | | | | | | | /----- Neem_977_f_4 [Azadirachta indica] (20) | | | | \-100-+ /-100+ | | | | | | \----- Ciclev10026328m [Citrus clementina] (38) | | \------100-----+ \-100+ /-82-+ | | \---------- evm.model.supercontig_6.118 [Carica papaya] (46) | | | | | | | | /----- Gh_D03G0136 [Gossypium hirsutum] (9) | | | | /-100+ | | | | | \----- Gorai.003G014300.1 [Gossypium raimondii] (28) | | | \------100------+ | | | \---------- Gh_A02G1587 [Gossypium hirsutum] (55) | | | | | \---------------------------------------------------- AA13G00037 [Aethionema arabicum] (36) | | --85-+ \--------------------------------------------------------- AA8G00071 [Aethionema arabicum] (19) | | /------------------------------- KFK34335.1 [Arabis alpina] (6) | | | | /----- Carubv10017765m [Capsella rubella] (13) | | /---100---+ | | | \----- Cagra.0926s0051.1.p [Capsella grandiflora] (17) | | | | | /-100-+ /---------- Csa09g002490.1 [Camelina sativa] (14) \--------------82--------------+ | | | | | \-100+ /----- Csa06g024980.1 [Camelina sativa] (41) | /-100+ \-99-+ | | | \----- Csa04g036610.1 [Camelina sativa] (53) | | | | | \--------------------- Bostr.6864s0159.1.p [Boechera stricta] (27) \-100+ | /---------- 866473 [Arabidopsis lyrata] (26) | | \------100------+ /----- Araha.12581s0007.1.p [Arabidopsis halleri] (34) \-90-+ \----- AT3G50870.1 [Arabidopsis thaliana] (56) Root part of tree: /------------------------------------------------------------------- XP_009136565.1 [Brassica rapa] (1) | |------------------------------------------------------------------- GSBRNA2T00151338001 [Brassica napus] (43) | | /-------- (92) | /-------88-------+ | | \-------- Thhalv10010986m [Eutrema salsugineum] (4) | | | /-------68-------+ /-------- RrC3451_p1 [Raphanus raphanistrum] (15) | | | /---100--+ | | | | \-------- Rsa1.0_00062.1_g00020.1 [Raphanus sativus] (39) | | \---51--+ | | \----------------- Tp5g11350 [Thellungiella parvula] (24) | | + | /-------- RrC1181_p3 [Raphanus raphanistrum] (8) | /--100--+ /-------100------+ | | | | \-------- Rsa1.0_03699.1_g00004.1 [Raphanus sativus] (16) | | | | | | | /--100--+ /-------- GSBRNA2T00129221001 [Brassica napus] (23) | | | | | /---100--+ | | | | | | \-------- XP_009115764.1 [Brassica rapa] (40) | | | | \--100--+ | /---100--+ \---100--+ | /-------- XP_013603273.1 [Brassica oleracea] (37) | | | | \---100--+ | | | | \-------- GSBRNA2T00109396001 [Brassica napus] (50) | | | | | | | \--------------------------------- 676745398 [Sisymbrium irio] (47) | | | \--100--+ | /-------- Rsa1.0_01180.1_g00001.1 [Raphanus sativus] (29) | \-------------------100-------------------+ | \-------- RrC9192_p1 [Raphanus raphanistrum] (49) | | /-------- GSBRNA2T00041707001 [Brassica napus] (11) \------------------------100-----------------------+ \-------- XP_013596593.1 [Brassica oleracea] (42) |