Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 63.2 | 3e-20 | 154 | 188 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
C+nC tt+TplWR+gp+g+k+LCnaCG++++k+++
AT3G50870.1 154 CANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 188
********************************986 PP
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Expression --
Description ? help
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Source |
Description |
Uniprot | DEVELOPMENTAL STAGE: In the developing axillary shoot apical meristem (SAM), expressed at the boundary between nascent axillary meristems and the adaxial side of leaves. In all mature SAMs, located at the boundaries between the central SAM and the initiating organ primordia, as well as between the neighboring initiating organ primordia. In the floral meristem, strongly expressed at the boundaries between the meristematic dome and the initiating floral organ primordia, and also at the boundaries between the primordia of different whorls. Expression at the boundaries attenuates as the organ primordia grow apart. In flowers, localized at the boundary between the central meristematic cells and differentiating stamen primordia to later accumulates at the medial ridge region of the carpel. Highly expressed in the developing anthers, in both the tapetum cell layer and microsporocytes. In developing ovules, confined to inner and outer integuments. In aerial tissues, strongly present in phloem tissues (PubMed:15367721). First observed in the whole embryo, but later confined to the center cells of the embryo and provascular tissues (PubMed:15367721, PubMed:20643354). {ECO:0000269|PubMed:15367721, ECO:0000269|PubMed:20643354}. |
Uniprot | TISSUE SPECIFICITY: Expressed in vegetative and inflorescence shoot apical meristems (SAMs), axillary (SAMs), floral meristems, developing ovules and stamens, vascular tissues, and in the embryo. {ECO:0000269|PubMed:15367721, ECO:0000269|PubMed:26390296}. |
Publications
? help Back to Top |
- Riechmann JL, et al.
Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Science, 2000. 290(5499): p. 2105-10 [PMID:11118137] - Jeong MJ,Jeong MJ,Shih MC
Interaction of a GATA factor with cis-acting elements involved in light regulation of nuclear genes encoding chloroplast glyceraldehyde-3-phosphate dehydrogenase in Arabidopsis. Biochem. Biophys. Res. Commun., 2003. 300(2): p. 555-62 [PMID:12504119] - Reyes JC,Muro-Pastor MI,Florencio FJ
The GATA family of transcription factors in Arabidopsis and rice. Plant Physiol., 2004. 134(4): p. 1718-32 [PMID:15084732] - Zhao Y, et al.
HANABA TARANU is a GATA transcription factor that regulates shoot apical meristem and flower development in Arabidopsis. Plant Cell, 2004. 16(10): p. 2586-600 [PMID:15367721] - Nawy T, et al.
Transcriptional profile of the Arabidopsis root quiescent center. Plant Cell, 2005. 17(7): p. 1908-25 [PMID:15937229] - Nakayama N, et al.
Gene trap lines define domains of gene regulation in Arabidopsis petals and stamens. Plant Cell, 2005. 17(9): p. 2486-506 [PMID:16055634] - Bi YM, et al.
Genetic analysis of Arabidopsis GATA transcription factor gene family reveals a nitrate-inducible member important for chlorophyll synthesis and glucose sensitivity. Plant J., 2005. 44(4): p. 680-92 [PMID:16262716] - Manfield IW,Devlin PF,Jen CH,Westhead DR,Gilmartin PM
Conservation, convergence, and divergence of light-responsive, circadian-regulated, and tissue-specific expression patterns during evolution of the Arabidopsis GATA gene family. Plant Physiol., 2007. 143(2): p. 941-58 [PMID:17208962] - Stracke R, et al.
Differential regulation of closely related R2R3-MYB transcription factors controls flavonol accumulation in different parts of the Arabidopsis thaliana seedling. Plant J., 2007. 50(4): p. 660-77 [PMID:17419845] - Ho LH, et al.
Identification of regulatory pathways controlling gene expression of stress-responsive mitochondrial proteins in Arabidopsis. Plant Physiol., 2008. 147(4): p. 1858-73 [PMID:18567827] - Whipple CJ, et al.
A conserved mechanism of bract suppression in the grass family. Plant Cell, 2010. 22(3): p. 565-78 [PMID:20305121] - Nawy T, et al.
The GATA factor HANABA TARANU is required to position the proembryo boundary in the early Arabidopsis embryo. Dev. Cell, 2010. 19(1): p. 103-13 [PMID:20643354] - Causier B,Ashworth M,Guo W,Davies B
The TOPLESS interactome: a framework for gene repression in Arabidopsis. Plant Physiol., 2012. 158(1): p. 423-38 [PMID:22065421] - Kanei M,Horiguchi G,Tsukaya H
Stable establishment of cotyledon identity during embryogenesis in Arabidopsis by ANGUSTIFOLIA3 and HANABA TARANU. Development, 2012. 139(13): p. 2436-46 [PMID:22669825] - Zhang X, et al.
Transcription repressor HANABA TARANU controls flower development by integrating the actions of multiple hormones, floral organ specification genes, and GATA3 family genes in Arabidopsis. Plant Cell, 2013. 25(1): p. 83-101 [PMID:23335616] - Behringer C,Bastakis E,Ranftl QL,Mayer KF,Schwechheimer C
Functional diversification within the family of B-GATA transcription factors through the leucine-leucine-methionine domain. Plant Physiol., 2014. 166(1): p. 293-305 [PMID:25077795] - Ding L, et al.
HANABA TARANU (HAN) Bridges Meristem and Organ Primordia Boundaries through PINHEAD, JAGGED, BLADE-ON-PETIOLE2 and CYTOKININ OXIDASE 3 during Flower Development in Arabidopsis. PLoS Genet., 2015. 11(9): p. e1005479 [PMID:26390296]
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