PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr2g0103751

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

Dof

Protein Properties

Length: 239aa MW: 24530.2 Da PI: 8.4946

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr2g0103751	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	122.4	1.6e-38	25	85	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++++l+cprC+stntkfCyynny+ sqPr+fCk+CrryWt+GG+lr++PvGgg+rkn k+s RcHm_v2.0_Chr2g0103751 25 EQEHLPCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGSRKNAKRS 85 57889****************************************************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence
MPSDSGDPNN RRPTKAQSLG APPPEQEHLP CPRCESTNTK FCYYNNYNFS QPRHFCKSCR 60 RYWTHGGTLR DIPVGGGSRK NAKRSRTSST GSMVSSASDH ALPATPVFVP VSAGQGGAGG 120 GAGQFGGCGV KGNVSNGGSF TSLLNTQPGF LALGGFGLGL ATGFEEMGFG FGRAMWPFPG 180 VGSDGGAGIG ANGVSHGMMN TWQFENGETG GLVNVGLGGG GEFCSWPELA ISTPGNGLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50410.1	4e-45	Dof family protein