PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023925140.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

WRKY

Protein Properties

Length: 629aa MW: 67958.1 Da PI: 6.853

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023925140.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.1	1.1e-30	354	412	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ XP_023925140.1 354 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRSILITTYEGNHNHP 412 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 629 aa Download sequence
MDKGWGLTLD SDSLGFFLNN NNNNNKRPPH PHPQRNLNNH HNKRSISVDN TMFPVNLGRR 60 DYHHHEPAAA ASSSPPSDHV ETRRAVVDEV DFFAKKPRLA SEDADHHDRD DDAPKTNRVS 120 VKKENSLGEA PSRPDLDVNT GLHLLTANTG SDQSTVDDGV SSESDDKRAK IELAHLQMEL 180 QRMNMENQRL KDMLGQVSNN YSVLHSHLVA LMQQQQTHGA DSAQENEAVE GKSEERKVEV 240 GGSQMVPIQF MNPGPGAAAE ADEISNSSSE DRTISGSPRN NSNVVKNSDV LPYDSDREGK 300 KVGREESPES ESQGWAPNKA PKLTPTKPID QSTEATMRKA RVSVRARSEA PMITDGCQWR 360 KYGQKMAKGN PCPRAYYRCT MAVGCPVRKQ VQRCAEDRSI LITTYEGNHN HPLPPAAMAM 420 ASTTAAAASM LLSGSMSSAD GIMNPNLLAR AILPCSSSMA TISASAPFPT VTLDLTHNPN 480 PLQFQRPPTQ FPIHFPGQGQ NGFGSVQTAQ LPQVFGQALY NQSKFSGLQL SQEMGHAQLG 540 HQAPQPPLHQ TQQQQPSLAD TVSAATAAIT ADPNFTAALA AAISSIIGGG AHPNNNNNTS 600 TTATNNNISA SMTTSNSNNS NKMGNFPGN

Sequence ? help Back to Top

Protein Sequence Length: 629 aa Download sequence

MDKGWGLTLD SDSLGFFLNN NNNNNKRPPH PHPQRNLNNH HNKRSISVDN TMFPVNLGRR  60
DYHHHEPAAA ASSSPPSDHV ETRRAVVDEV DFFAKKPRLA SEDADHHDRD DDAPKTNRVS  120
VKKENSLGEA PSRPDLDVNT GLHLLTANTG SDQSTVDDGV SSESDDKRAK IELAHLQMEL  180
QRMNMENQRL KDMLGQVSNN YSVLHSHLVA LMQQQQTHGA DSAQENEAVE GKSEERKVEV  240
GGSQMVPIQF MNPGPGAAAE ADEISNSSSE DRTISGSPRN NSNVVKNSDV LPYDSDREGK  300
KVGREESPES ESQGWAPNKA PKLTPTKPID QSTEATMRKA RVSVRARSEA PMITDGCQWR  360
KYGQKMAKGN PCPRAYYRCT MAVGCPVRKQ VQRCAEDRSI LITTYEGNHN HPLPPAAMAM  420
ASTTAAAASM LLSGSMSSAD GIMNPNLLAR AILPCSSSMA TISASAPFPT VTLDLTHNPN  480
PLQFQRPPTQ FPIHFPGQGQ NGFGSVQTAQ LPQVFGQALY NQSKFSGLQL SQEMGHAQLG  540
HQAPQPPLHQ TQQQQPSLAD TVSAATAAIT ADPNFTAALA AAISSIIGGG AHPNNNNNTS  600
TTATNNNISA SMTTSNSNNS NKMGNFPGN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-141	WRKY family protein