PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023925139.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

WRKY

Protein Properties

Length: 631aa MW: 68186.4 Da PI: 6.853

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023925139.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.1	1.2e-30	356	414	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ XP_023925139.1 356 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRSILITTYEGNHNHP 414 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 631 aa Download sequence
MDKGWGLTLD SDSLGFFLNN NNNNNNNKRP PHPHPQRNLN NHHNKRSISV DNTMFPVNLG 60 RRDYHHHEPA AAASSSPPSD HVETRRAVVD EVDFFAKKPR LASEDADHHD RDDDAPKTNR 120 VSVKKENSLG EAPSRPDLDV NTGLHLLTAN TGSDQSTVDD GVSSESDDKR AKIELAHLQM 180 ELQRMNMENQ RLKDMLGQVS NNYSVLHSHL VALMQQQQTH GADSAQENEA VEGKSEERKV 240 EVGGSQMVPI QFMNPGPGAA AEADEISNSS SEDRTISGSP RNNSNVVKNS DVLPYDSDRE 300 GKKVGREESP ESESQGWAPN KAPKLTPTKP IDQSTEATMR KARVSVRARS EAPMITDGCQ 360 WRKYGQKMAK GNPCPRAYYR CTMAVGCPVR KQVQRCAEDR SILITTYEGN HNHPLPPAAM 420 AMASTTAAAA SMLLSGSMSS ADGIMNPNLL ARAILPCSSS MATISASAPF PTVTLDLTHN 480 PNPLQFQRPP TQFPIHFPGQ GQNGFGSVQT AQLPQVFGQA LYNQSKFSGL QLSQEMGHAQ 540 LGHQAPQPPL HQTQQQQPSL ADTVSAATAA ITADPNFTAA LAAAISSIIG GGAHPNNNNN 600 TSTTATNNNI SASMTTSNSN NSNKMGNFPG N

Sequence ? help Back to Top

Protein Sequence Length: 631 aa Download sequence

MDKGWGLTLD SDSLGFFLNN NNNNNNNKRP PHPHPQRNLN NHHNKRSISV DNTMFPVNLG  60
RRDYHHHEPA AAASSSPPSD HVETRRAVVD EVDFFAKKPR LASEDADHHD RDDDAPKTNR  120
VSVKKENSLG EAPSRPDLDV NTGLHLLTAN TGSDQSTVDD GVSSESDDKR AKIELAHLQM  180
ELQRMNMENQ RLKDMLGQVS NNYSVLHSHL VALMQQQQTH GADSAQENEA VEGKSEERKV  240
EVGGSQMVPI QFMNPGPGAA AEADEISNSS SEDRTISGSP RNNSNVVKNS DVLPYDSDRE  300
GKKVGREESP ESESQGWAPN KAPKLTPTKP IDQSTEATMR KARVSVRARS EAPMITDGCQ  360
WRKYGQKMAK GNPCPRAYYR CTMAVGCPVR KQVQRCAEDR SILITTYEGN HNHPLPPAAM  420
AMASTTAAAA SMLLSGSMSS ADGIMNPNLL ARAILPCSSS MATISASAPF PTVTLDLTHN  480
PNPLQFQRPP TQFPIHFPGQ GQNGFGSVQT AQLPQVFGQA LYNQSKFSGL QLSQEMGHAQ  540
LGHQAPQPPL HQTQQQQPSL ADTVSAATAA ITADPNFTAA LAAAISSIIG GGAHPNNNNN  600
TSTTATNNNI SASMTTSNSN NSNKMGNFPG N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-143	WRKY family protein