PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023921980.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

WRKY

Protein Properties

Length: 181aa MW: 21165.7 Da PI: 9.7964

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023921980.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.8	4.7e-33	102	160	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+++fprsYYrCt++gC+vkk+v+r ++d+ +v++tYeg H+h+ XP_023921980.1 102 LDDGYRWRKYGQKAVKNNKFPRSYYRCTYQGCNVKKQVQRLTKDEAIVVTTYEGMHTHQ 160 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 181 aa Download sequence
MENYQMFFPC SSTGQSTYPF STNMGSSNAY HNLHGESSKG FIGLGTENHH VPRDQVNKQL 60 SQRTESFARD ESDEVKPSKK KGEKKIRKPR YAFQTRSQVD ILDDGYRWRK YGQKAVKNNK 120 FPRSYYRCTY QGCNVKKQVQ RLTKDEAIVV TTYEGMHTHQ IEKPTDNFEH ILSQMQIYTP 180 F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13080.1	1e-57	WRKY family protein